General features
| Gene ID | MPN174
|
| Type | CDS
|
| From | 223371
|
| To | 223628
|
| Strand | +
|
| General name | rpsQ
|
| Definition | ribosomal protein S17
|
| nt length | 258
|
| aa length | 85
|
| m.w. | 9833.53
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10080 rpsQ ribosomal protein S17 1324457:1324182 | 88 | 3.1e-26
|
| mgen | WP_009885844.1 30S ribosomal protein S17 [Mycoplasma genitalium] | 140 | 2.6e-47
|
| mpul | WP_010925379.1 30S ribosomal protein S17 [Mycoplasma pulmonis] | 73 | 1.3e-20
|
| mmob | WP_011264764.1 30S ribosomal protein S17 [Mycoplasma mobile] | 72 | 4.0e-20
|
| mmyc | NP_975712.1 30S ribosomal protein S17 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 89 | 5.7e-27
|
| mgal | WP_011113289.1 30S ribosomal protein S17 [Mycoplasma gallisepticum] | 115 | 4.9e-37
|
| uure | WP_004025503.1 MULTISPECIES: 30S ribosomal protein S17 [Ureaplasma] | 96 | 1.1e-29
|
| phyt | WP_011160584.1 MULTISPECIES: 30S ribosomal protein S17 [Candidatus Phytoplasma] | 74 | 3.2e-21
|
| bsub | NP_388006.1 ribosomal protein S17 (BS16) [Bacillus subtilis subsp. subtilis str. 168] | 79 | 2.8e-22
|
| cace | WP_010966403.1 MULTISPECIES: 30S ribosomal protein S17 [Clostridium] | 78 | 6.1e-22
|
| ecoli | NP_417770.1 30S ribosomal subunit protein S17 [Escherichia coli str. K-12 substr. MG1655] | 51 | 2.3e-11
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_S17 | 1 | Ribosomal protein S17 | 11-78 | 88.3 | 2.7e-25
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874531.1| 30S ribosomal protein S17 [Mycoplasma pneumoniae] | 85/85 (100%) | 433 | 4.6e-54
|
| ref|WP_014574903.1| 30S ribosomal protein S17 [Mycoplasma pneumoniae] | 84/85 (98%) | 429 | 2.6e-53
|
| ref|WP_014325389.1| 30S ribosomal protein S17 [Mycoplasma pneumoniae] | 84/85 (98%) | 427 | 3.8e-53
|
| ref|WP_009885844.1| 30S ribosomal protein S17 [Mycoplasma genitalium] | 68/85 (80%) | 353 | 8.9e-42
|
| ref|WP_011113289.1| 30S ribosomal protein S17 [Mycoplasma gallisepticum] | 60/83 (72%) | 287 | 1.1e-31
|
| ref|WP_027122184.1| 30S ribosomal protein S17 [Mycoplasma imitans] | 59/83 (71%) | 285 | 2.4e-31
|
| ref|WP_033160183.1| 30S ribosomal protein S17 [Mycoplasma alvi] | 53/85 (62%) | 273 | 1.4e-29
|
| ref|WP_027124212.1| 30S ribosomal protein S17 [Mycoplasma pirum] | 54/85 (63%) | 268 | 7.0e-29
|
| ref|WP_027120095.1| 30S ribosomal protein S17 [Mycoplasma testudinis] | 50/84 (59%) | 257 | 4.0e-27
|
| ref|WP_051749346.1| 30S ribosomal protein S17 [Ureaplasma diversum] | 51/85 (60%) | 245 | 2.3e-25
|
Maintained by Jun Ishikawa