General features
| Gene ID | MPN173
|
| Type | CDS
|
| From | 223036
|
| To | 223371
|
| Strand | +
|
| General name | rpmC
|
| Definition | ribosomal protein L29
|
| nt length | 336
|
| aa length | 111
|
| m.w. | 12974.16
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10100 rpmC ribosomal protein L29 1326466:1325732 | 53 | 3.2e-11
|
| mgen | WP_009885843.1 50S ribosomal protein L29 [Mycoplasma genitalium] | 153 | 2.1e-50
|
| mpul | WP_010925380.1 50S ribosomal protein L29 [Mycoplasma pulmonis] | 40 | 1.8e-07
|
| mmob | WP_011264763.1 50S ribosomal protein L29 [Mycoplasma mobile] | 38 | 8.5e-07
|
| mmyc | NP_975713.1 50S ribosomal protein L29 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 34 | 1.5e-04
|
| mgal | WP_011113288.1 50S ribosomal protein L29 [Mycoplasma gallisepticum] | 83 | 1.9e-23
|
| uure | WP_004026203.1 MULTISPECIES: 50S ribosomal protein L29 [Ureaplasma] | 58 | 2.4e-14
|
| phyt | WP_011160583.1 50S ribosomal protein L29 [Onion yellows phytoplasma] | 34 | 3.1e-05
|
| bsub | NP_388005.1 ribosomal protein L29 [Bacillus subtilis subsp. subtilis str. 168] | 38 | 4.0e-06
|
| cace | WP_010966404.1 MULTISPECIES: 50S ribosomal protein L29 [Clostridium] | 47 | 1.7e-09
|
| ecoli | NP_417771.1 50S ribosomal subunit protein L29 [Escherichia coli str. K-12 substr. MG1655] | 36 | 2.9e-05
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L29 | 1 | Ribosomal L29 protein | 5-61 | 60.7 | 9.7e-17
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874530.1| 50S ribosomal protein L29 [Mycoplasma pneumoniae] | 111/111 (100%) | 548 | 9.5e-71
|
| ref|WP_086132689.1| 50S ribosomal protein L29 [Mycoplasma pneumoniae] | 110/111 (99%) | 546 | 2.2e-70
|
| ref|WP_009885843.1| 50S ribosomal protein L29 [Mycoplasma genitalium] | 73/91 (80%) | 386 | 7.0e-45
|
| ref|WP_033160182.1| 50S ribosomal protein L29 [Mycoplasma alvi] | 53/107 (49%) | 224 | 7.1e-21
|
| ref|WP_027124213.1| 50S ribosomal protein L29 [Mycoplasma pirum] | 41/59 (69%) | 211 | 8.2e-19
|
| ref|WP_027122183.1| 50S ribosomal protein L29 [Mycoplasma imitans] | 45/69 (65%) | 209 | 1.3e-18
|
| ref|WP_052663571.1| 50S ribosomal protein L29 [Mycoplasma testudinis] | 39/60 (65%) | 209 | 1.3e-18
|
| ref|WP_011113288.1| 50S ribosomal protein L29 [Mycoplasma gallisepticum] | 40/59 (67%) | 205 | 4.1e-18
|
| ref|WP_065165404.1| 50S ribosomal protein L29 [Mycoplasma gallisepticum] | 40/59 (67%) | 205 | 4.3e-18
|
| ref|WP_011883704.1| 50S ribosomal protein L29 [Mycoplasma gallisepticum] | 40/59 (67%) | 205 | 5.1e-18
|
Maintained by Jun Ishikawa