General features
| Gene ID | MPN172
|
| Type | CDS
|
| From | 222617
|
| To | 223036
|
| Strand | +
|
| General name | rplP
|
| Definition | ribosomal protein L16
|
| nt length | 420
|
| aa length | 139
|
| m.w. | 15617.36
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10110 rplP ribosomal protein L16 1326875:1326453 | 216 | 2.5e-75
|
| mgen | WP_009885842.1 50S ribosomal protein L16 [Mycoplasma genitalium] | 269 | 1.5e-96
|
| mpul | WP_010925381.1 50S ribosomal protein L16 [Mycoplasma pulmonis] | 149 | 3.9e-49
|
| mmob | WP_011264762.1 50S ribosomal protein L16 [Mycoplasma mobile] | 139 | 5.0e-45
|
| mmyc | NP_975714.1 50S ribosomal protein L16 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 182 | 5.2e-62
|
| mgal | WP_011113287.1 50S ribosomal protein L16 [Mycoplasma gallisepticum] | 251 | 1.7e-89
|
| uure | WP_004026134.1 50S ribosomal protein L16 [Ureaplasma urealyticum] | 207 | 4.4e-72
|
| phyt | WP_011160582.1 MULTISPECIES: 50S ribosomal protein L16 [Candidatus Phytoplasma asteris] | 161 | 4.6e-54
|
| bsub | NP_388004.1 ribosomal protein L16 [Bacillus subtilis subsp. subtilis str. 168] | 149 | 4.2e-48
|
| cace | WP_010966405.1 MULTISPECIES: 50S ribosomal protein L16 [Clostridium] | 136 | 2.6e-43
|
| ecoli | NP_417772.1 50S ribosomal subunit protein L16 [Escherichia coli str. K-12 substr. MG1655] | 120 | 4.8e-37
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L16 | 1 | Ribosomal protein L16p/L10e | 4-131 | 148.2 | 1.3e-43
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874529.1| 50S ribosomal protein L16 [Mycoplasma pneumoniae] | 139/139 (100%) | 732 | 7.1e-98
|
| ref|WP_009885842.1| 50S ribosomal protein L16 [Mycoplasma genitalium] | 128/138 (92%) | 687 | 5.0e-91
|
| ref|WP_011113287.1| 50S ribosomal protein L16 [Mycoplasma gallisepticum] | 121/135 (89%) | 642 | 3.6e-84
|
| ref|WP_027122182.1| 50S ribosomal protein L16 [Mycoplasma imitans] | 120/135 (88%) | 640 | 8.6e-84
|
| ref|WP_014885807.1| 50S ribosomal protein L16 [Mycoplasma gallisepticum] | 120/135 (88%) | 636 | 2.9e-83
|
| ref|WP_033160181.1| 50S ribosomal protein L16 [Mycoplasma alvi] | 116/139 (83%) | 630 | 2.3e-82
|
| ref|WP_027124214.1| 50S ribosomal protein L16 [Mycoplasma pirum] | 115/135 (85%) | 622 | 4.0e-81
|
| ref|WP_004024697.1| 50S ribosomal protein L16 [Mycoplasma iowae] | 109/136 (80%) | 580 | 1.2e-74
|
| ref|WP_027120094.1| 50S ribosomal protein L16 [Mycoplasma testudinis] | 109/138 (78%) | 577 | 3.6e-74
|
| ref|WP_038101552.1| 50S ribosomal protein L16 [Ureaplasma diversum] | 109/138 (78%) | 559 | 1.7e-71
|
Maintained by Jun Ishikawa