General features
| Gene ID | MPN168
|
| Type | CDS
|
| From | 220187
|
| To | 221050
|
| Strand | +
|
| General name | rplB
|
| Definition | ribosomal protein L2
|
| nt length | 864
|
| aa length | 287
|
| m.w. | 31901.52
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10150 rplB ribosomal protein L2 1329071:1328232 | 391 | 7.2e-140
|
| mgen | WP_009885838.1 50S ribosomal protein L2 [Mycoplasma genitalium] | 516 | 0.0e+00
|
| mpul | WP_010925386.1 50S ribosomal protein L2 [Mycoplasma pulmonis] | 352 | 1.6e-124
|
| mmob | WP_011264758.1 50S ribosomal protein L2 [Mycoplasma mobile] | 340 | 4.6e-120
|
| mmyc | NP_975718.1 50S ribosomal protein L2 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 330 | 1.0e-115
|
| mgal | WP_011113283.1 50S ribosomal protein L2 [Mycoplasma gallisepticum] | 422 | 2.0e-152
|
| uure | WP_012560226.1 50S ribosomal protein L2 [Ureaplasma urealyticum] | 384 | 2.9e-137
|
| phyt | WP_011160578.1 50S ribosomal protein L2 [Onion yellows phytoplasma] | 298 | 2.0e-103
|
| bsub | NP_388000.2 ribosomal protein L2 (BL2) [Bacillus subtilis subsp. subtilis str. 168] | 303 | 1.0e-104
|
| cace | WP_010966409.1 MULTISPECIES: 50S ribosomal protein L2 [Clostridium] | 286 | 4.2e-98
|
| ecoli | NP_417776.1 50S ribosomal subunit protein L2 [Escherichia coli str. K-12 substr. MG1655] | 246 | 3.5e-82
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L2_C | 1 | Ribosomal Proteins L2, C-terminal domain | 131-259 | 175.2 | 5.6e-52
|
| Ribosomal_L2 | 1 | Ribosomal Proteins L2, RNA binding domain | 46-122 | 99.3 | 9e-29
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874525.1| 50S ribosomal protein L2 [Mycoplasma pneumoniae] | 287/287 (100%) | 1509 | 0.0e+00
|
| ref|WP_054175800.1| 50S ribosomal protein L2 [Mycoplasma pneumoniae] | 286/287 (99%) | 1504 | 0.0e+00
|
| ref|WP_014894599.1| 50S ribosomal protein L2 [Mycoplasma genitalium] | 250/287 (87%) | 1329 | 0.0e+00
|
| ref|WP_009885838.1| 50S ribosomal protein L2 [Mycoplasma genitalium] | 250/287 (87%) | 1329 | 0.0e+00
|
| ref|WP_033160177.1| 50S ribosomal protein L2 [Mycoplasma alvi] | 223/282 (79%) | 1172 | 3.5e-160
|
| ref|WP_027124217.1| 50S ribosomal protein L2 [Mycoplasma pirum] | 219/282 (77%) | 1162 | 1.0e-158
|
| ref|WP_027120090.1| 50S ribosomal protein L2 [Mycoplasma testudinis] | 214/282 (75%) | 1142 | 1.2e-155
|
| ref|WP_151059546.1| 50S ribosomal protein L2 [Mycoplasma gallisepticum] | 206/282 (73%) | 1086 | 4.1e-147
|
| ref|WP_011113283.1| 50S ribosomal protein L2 [Mycoplasma gallisepticum] | 206/282 (73%) | 1086 | 4.4e-147
|
| ref|WP_011883703.1| 50S ribosomal protein L2 [Mycoplasma gallisepticum] | 206/282 (73%) | 1084 | 8.8e-147
|
Maintained by Jun Ishikawa