General features
| Gene ID | MPN167
|
| Type | CDS
|
| From | 219474
|
| To | 220187
|
| Strand | +
|
| General name | rplW
|
| Definition | ribosomal protein L23
|
| nt length | 714
|
| aa length | 237
|
| m.w. | 25838.53
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10160 rplW ribosomal protein L23 1329522:1329106 | 95 | 2.8e-26
|
| mgen | WP_009885837.1 50S ribosomal protein L23 [Mycoplasma genitalium] | 163 | 1.1e-53
|
| mpul | WP_010925387.1 50S ribosomal protein L23 [Mycoplasma pulmonis] | 47 | 1.7e-08
|
| mmob | WP_011264757.1 50S ribosomal protein L23 [Mycoplasma mobile] | 42 | 1.2e-06
|
| mmyc | NP_975719.1 50S ribosomal protein L23 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 42 | 4.6e-07
|
| mgal | WP_011113282.1 50S ribosomal protein L23 [Mycoplasma gallisepticum] | 114 | 2.1e-34
|
| uure | WP_004025740.1 50S ribosomal protein L23 [Ureaplasma urealyticum] | 69 | 4.1e-17
|
| phyt | WP_011160577.1 MULTISPECIES: 50S ribosomal protein L23 [Candidatus Phytoplasma asteris] | 28 | 1.5e-02
|
| bsub | NP_387999.2 ribosomal protein L23 [Bacillus subtilis subsp. subtilis str. 168] | 47 | 2.8e-08
|
| cace | WP_010966410.1 MULTISPECIES: 50S ribosomal protein L23 [Clostridium] | 46 | 5.9e-08
|
| ecoli | NP_417777.1 50S ribosomal subunit protein L23 [Escherichia coli str. K-12 substr. MG1655] | 27 | 3.9e-01
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L23 | 1 | Ribosomal protein L23 | 5-91 | 63.0 | 2.5e-17
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874524.1| 50S ribosomal protein L23 [Mycoplasma pneumoniae] | 237/237 (100%) | 1124 | 2.2e-154
|
| ref|WP_159201926.1| 50S ribosomal protein L23 [Mycoplasma pneumoniae] | 236/237 (99%) | 1120 | 7.1e-154
|
| ref|WP_017532915.1| 50S ribosomal protein L23 [Mycoplasma pneumoniae] | 236/237 (99%) | 1116 | 2.9e-153
|
| ref|WP_161609642.1| 50S ribosomal protein L23 [Mycoplasma pneumoniae] | 235/237 (99%) | 1115 | 4.6e-153
|
| ref|WP_058129032.1| 50S ribosomal protein L23 [Mycoplasma pneumoniae] | 235/237 (99%) | 1113 | 8.8e-153
|
| ref|WP_159243758.1| 50S ribosomal protein L23, partial [Mycoplasma pneumoniae] | 225/228 (98%) | 1079 | 1.2e-147
|
| ref|WP_159204522.1| 50S ribosomal protein L23 [Mycoplasma pneumoniae] | 221/237 (93%) | 1027 | 7.3e-140
|
| ref|WP_159203813.1| 50S ribosomal protein L23, partial [Mycoplasma pneumoniae] | 211/211 (100%) | 1021 | 4.1e-139
|
| ref|WP_009885837.1| 50S ribosomal protein L23 [Mycoplasma genitalium] | 73/96 (76%) | 413 | 3.7e-48
|
| ref|WP_027122178.1| 50S ribosomal protein L23 [Mycoplasma imitans] | 53/99 (53%) | 293 | 5.1e-30
|
Maintained by Jun Ishikawa