General features
| Gene ID | MPN164
|
| Type | CDS
|
| From | 217630
|
| To | 217956
|
| Strand | +
|
| General name | rpsJ
|
| Definition | ribosomal protein S10
|
| nt length | 327
|
| aa length | 108
|
| m.w. | 12202.44
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10190 rpsJ ribosomal protein S10 1331504:1331115 | 104 | 6.7e-32
|
| mgen | WP_009885835.1 30S ribosomal protein S10 [Mycoplasma genitalium] | 193 | 1.4e-67
|
| mpul | WP_010925391.1 30S ribosomal protein S10 [Mycoplasma pulmonis] | 81 | 2.9e-23
|
| mmob | WP_011264754.1 30S ribosomal protein S10 [Mycoplasma mobile] | 96 | 5.0e-29
|
| mmyc | NP_975722.1 30S ribosomal protein S10 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 89 | 2.6e-26
|
| mgal | WP_011113279.1 30S ribosomal protein S10 [Mycoplasma gallisepticum] | 121 | 1.2e-38
|
| uure | WP_012560201.1 30S ribosomal protein S10 [Ureaplasma urealyticum] | 112 | 2.2e-35
|
| phyt | WP_011160574.1 MULTISPECIES: 30S ribosomal protein S10 [Candidatus Phytoplasma asteris] | 90 | 8.1e-27
|
| bsub | NP_387996.1 ribosomal protein S10 (BS13); transcription antitermination factor [Bacillus subtilis subsp. subtilis str. 168] | 84 | 7.5e-24
|
| cace | WP_010966413.1 MULTISPECIES: 30S ribosomal protein S10 [Clostridium] | 93 | 2.1e-27
|
| ecoli | NP_417780.1 30S ribosomal subunit protein S10 [Escherichia coli str. K-12 substr. MG1655] | 83 | 2.1e-23
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_S10 | 1 | Ribosomal protein S10p/S20e | 13-105 | 96.1 | 1.1e-27
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874521.1| 30S ribosomal protein S10 [Mycoplasma pneumoniae] | 108/108 (100%) | 545 | 2.2e-70
|
| ref|WP_054175380.1| 30S ribosomal protein S10 [Mycoplasma pneumoniae] | 107/108 (99%) | 540 | 1.1e-69
|
| ref|WP_159201771.1| 30S ribosomal protein S10 [Mycoplasma pneumoniae] | 107/108 (99%) | 539 | 2.2e-69
|
| ref|WP_009885835.1| 30S ribosomal protein S10 [Mycoplasma genitalium] | 99/108 (91%) | 490 | 4.8e-62
|
| ref|WP_027124221.1| 30S ribosomal protein S10 [Mycoplasma pirum] | 64/97 (65%) | 332 | 5.8e-38
|
| ref|WP_033160174.1| 30S ribosomal protein S10 [Mycoplasma alvi] | 65/96 (67%) | 326 | 4.1e-37
|
| ref|WP_027120087.1| 30S ribosomal protein S10 [Mycoplasma testudinis] | 63/95 (66%) | 319 | 5.4e-36
|
| ref|WP_011113279.1| 30S ribosomal protein S10 [Mycoplasma gallisepticum] | 61/95 (64%) | 303 | 2.6e-33
|
| ref|WP_014885802.1| 30S ribosomal protein S10 [Mycoplasma gallisepticum] | 61/95 (64%) | 303 | 2.7e-33
|
| ref|WP_081275332.1| 30S ribosomal protein S10 [Mycoplasma gallisepticum] | 61/95 (64%) | 303 | 3.1e-33
|
Maintained by Jun Ishikawa