General features
| Gene ID | MPN155
|
| Type | CDS
|
| From | 207704
|
| To | 209557
|
| Strand | +
|
| General name | infB
|
| Definition | protein synthesis initiation factor 2
|
| nt length | 1854
|
| aa length | 617
|
| m.w. | 67896.85
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE1110 infB translation initiation factor IF-2 138728:140590 | 525 | 0.0e+00
|
| mgen | WP_010869352.1 translation initiation factor IF-2 [Mycoplasma genitalium] | 995 | 0.0e+00
|
| mpul | WP_010925009.1 translation initiation factor IF-2 [Mycoplasma pulmonis] | 459 | 6.5e-157
|
| mmob | WP_011264672.1 translation initiation factor IF-2 [Mycoplasma mobile] | 476 | 1.2e-163
|
| mmyc | NP_975344.1 translation initiation factor IF-2 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 500 | 1.0e-172
|
| mgal | WP_011113343.1 translation initiation factor IF-2 [Mycoplasma gallisepticum] | 652 | 0.0e+00
|
| uure | WP_012560304.1 translation initiation factor IF-2 [Ureaplasma urealyticum] | 563 | 0.0e+00
|
| phyt | WP_011160525.1 translation initiation factor IF-2 [Onion yellows phytoplasma] | 431 | 4.2e-146
|
| bsub | NP_389545.1 initiation factor IF-2 [Bacillus subtilis subsp. subtilis str. 168] | 472 | 8.8e-160
|
| ecoli | NP_417637.1 translation initiation factor IF-2 [Escherichia coli str. K-12 substr. MG1655] | 404 | 1.8e-131
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| GTP_EFTU | 1 | Elongation factor Tu GTP binding domain | 124-281 | 124.6 | 3.5e-36
|
| IF-2 | 1 | Translation-initiation factor 2 | 403-507 | 76.6 | 1.4e-21
|
| MMR_HSR1 | 1 | 50S ribosome-binding GTPase | 124-230 | 44.2 | 1.7e-11
|
| SRPRB | 1 | Signal recognition particle receptor beta subunit | 122-184 | 31.9 | 8.4e-08
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874512.1| translation initiation factor IF-2 [Mycoplasma pneumoniae] | 617/617 (100%) | 3263 | 0.0e+00
|
| ref|WP_058157841.1| translation initiation factor IF-2 [Mycoplasma pneumoniae] | 616/617 (99%) | 3258 | 0.0e+00
|
| ref|WP_017532912.1| translation initiation factor IF-2 [Mycoplasma pneumoniae] | 616/617 (99%) | 3254 | 0.0e+00
|
| ref|WP_014325382.1| translation initiation factor IF-2 [Mycoplasma pneumoniae] | 616/617 (99%) | 3253 | 0.0e+00
|
| ref|WP_086127244.1| translation initiation factor IF-2 [Mycoplasma pneumoniae] | 615/617 (99%) | 3242 | 0.0e+00
|
| ref|WP_014894408.1| translation initiation factor IF-2 [Mycoplasma genitalium] | 479/610 (78%) | 2574 | 0.0e+00
|
| ref|WP_010869352.1| translation initiation factor IF-2 [Mycoplasma genitalium] | 479/610 (78%) | 2572 | 0.0e+00
|
| ref|WP_014894592.1| translation initiation factor IF-2 [Mycoplasma genitalium] | 479/610 (78%) | 2570 | 0.0e+00
|
| ref|WP_050982307.1| translation initiation factor IF-2 [Mycoplasma genitalium] | 472/596 (79%) | 2551 | 0.0e+00
|
| ref|WP_050983338.1| translation initiation factor IF-2 [Mycoplasma genitalium] | 471/596 (79%) | 2548 | 0.0e+00
|
Maintained by Jun Ishikawa