General features
| Gene ID | MYPE1450
|
| Type | CDS
|
| From | 172947
|
| To | 173510
|
| Strand | +
|
| General name | pth
|
| Definition | peptidyl-tRNA hydrolase
|
| nt length | 564
|
| aa length | 187
|
| m.w. | 21327.61
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN221 pth peptidyl-tRNA hydrolase 273142:273708 | 126 | 8.0e-39
|
| mgen | WP_009885642.1 aminoacyl-tRNA hydrolase [Mycoplasma genitalium] | 121 | 8.7e-37
|
| mpul | WP_010925581.1 aminoacyl-tRNA hydrolase [Mycoplasma pulmonis] | 128 | 2.6e-39
|
| mmob | WP_041362970.1 aminoacyl-tRNA hydrolase [Mycoplasma mobile] | 155 | 2.4e-50
|
| mmyc | NP_975921.1 peptidyl-tRNA hydrolase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 136 | 1.3e-42
|
| mgal | WP_011113927.1 aminoacyl-tRNA hydrolase [Mycoplasma gallisepticum] | 159 | 1.1e-51
|
| uure | WP_004027158.1 aminoacyl-tRNA hydrolase [Ureaplasma urealyticum] | 195 | 8.1e-66
|
| phyt | WP_011160527.1 peptidyl-tRNA hydrolase [Onion yellows phytoplasma] | 115 | 2.4e-34
|
| bsub | NP_387934.1 peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str. 168] | 167 | 7.6e-54
|
| cace | WP_010966493.1 MULTISPECIES: aminoacyl-tRNA hydrolase [Clostridium] | 161 | 7.5e-52
|
| ecoli | NP_415722.1 peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. MG1655] | 86 | 2.0e-22
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Pept_tRNA_hydro | 1 | Peptidyl-tRNA hydrolase | 5-185 | 198.4 | 8.2e-59
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011076972.1| aminoacyl-tRNA hydrolase [Mycoplasma penetrans] | 187/187 (100%) | 978 | 7.4e-134
|
| ref|WP_004024669.1| aminoacyl-tRNA hydrolase [Mycoplasma iowae] | 106/186 (56%) | 515 | 2.7e-63
|
| ref|WP_004027158.1| aminoacyl-tRNA hydrolase [Ureaplasma urealyticum] | 101/186 (54%) | 496 | 1.9e-60
|
| ref|WP_004026167.1| aminoacyl-tRNA hydrolase [Ureaplasma urealyticum] | 100/186 (53%) | 495 | 2.7e-60
|
| ref|WP_044742025.1| MULTISPECIES: aminoacyl-tRNA hydrolase [unclassified Anoxybacillus] | 93/183 (50%) | 476 | 2.3e-57
|
| ref|WP_066151212.1| MULTISPECIES: aminoacyl-tRNA hydrolase [unclassified Anoxybacillus] | 92/183 (50%) | 473 | 5.4e-57
|
| ref|WP_031488813.1| aminoacyl-tRNA hydrolase [Ureaplasma canigenitalium] | 99/186 (53%) | 471 | 1.4e-56
|
| ref|WP_066322191.1| aminoacyl-tRNA hydrolase [Anoxybacillus amylolyticus] | 90/183 (49%) | 470 | 2.0e-56
|
| ref|WP_006688439.1| aminoacyl-tRNA hydrolase [Ureaplasma parvum] | 97/186 (52%) | 468 | 3.6e-56
|
| ref|WP_027410134.1| aminoacyl-tRNA hydrolase [Anoxybacillus tepidamans] | 88/182 (48%) | 466 | 7.6e-56
|
Maintained by Jun Ishikawa