General features

Gene IDMPN122
TypeCDS
From156467
To158374
Strand+
General nameparB
Definitiontopoisomerase IV subunit B
nt length1908
aa length635
m.w.72412.31
COG[L] Replication, recombination and repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE6480 parE DNA topoisomerase IV subunit B 830334:8284396790.0e+00
mgenWP_010869371.1 DNA topoisomerase IV subunit B [Mycoplasma genitalium]9370.0e+00
mpulWP_010925176.1 DNA topoisomerase IV subunit B [Mycoplasma pulmonis]5720.0e+00
mmobWP_011264906.1 DNA topoisomerase IV subunit B [Mycoplasma mobile]6000.0e+00
mmycNP_975496.1 DNA topoisomerase IV subunit B [Mycoplasma mycoides subsp. mycoides SC str. PG1]5710.0e+00
mgalWP_011113666.1 DNA topoisomerase IV subunit B [Mycoplasma gallisepticum]6950.0e+00
uureWP_004026577.1 DNA topoisomerase IV subunit B [Ureaplasma urealyticum]6380.0e+00
bsubNP_389691.2 subunit B of DNA topoisomerase IV (ATP-dependent) [Bacillus subtilis subsp. subtilis str. 168]6110.0e+00

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

DNA_gyraseB1DNA gyrase B223-393144.71.9e-42

DNA_gyraseB_C1DNA gyrase B subunit, carboxyl terminus566-62693.27.9e-27

HATPase_c1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase30-17573.51.8e-20

Toprim1Toprim domain423-53262.34e-17

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874479.1| DNA topoisomerase IV subunit B [Mycoplasma pneumoniae] 635/635 (100%)33730.0e+00
ref|WP_014325357.1| DNA topoisomerase IV subunit B [Mycoplasma pneumoniae]634/635 (99%)33680.0e+00
ref|WP_014574880.1| DNA topoisomerase IV subunit B [Mycoplasma pneumoniae]633/635 (99%)33670.0e+00
ref|WP_086137858.1| DNA topoisomerase IV subunit B [Mycoplasma pneumoniae]633/635 (99%)33650.0e+00
ref|WP_054175511.1| DNA topoisomerase IV subunit B [Mycoplasma pneumoniae]633/635 (99%)33550.0e+00
ref|WP_010869371.1| DNA topoisomerase IV subunit B [Mycoplasma genitalium]448/635 (70%)24230.0e+00
ref|WP_014894212.1| DNA topoisomerase IV subunit B [Mycoplasma genitalium]448/635 (70%)24220.0e+00
ref|WP_036448661.1| DNA topoisomerase IV subunit B [Mycoplasma pirum]348/627 (55%)18770.0e+00
ref|WP_027119497.1| DNA topoisomerase IV subunit B [Mycoplasma testudinis]338/631 (53%)18200.0e+00
ref|WP_027333179.1| DNA topoisomerase IV subunit B [Mycoplasma gallisepticum]335/634 (52%)18050.0e+00

Maintained by Jun Ishikawa