General features
| Gene ID | MPN115
|
| Type | CDS
|
| From | 150643
|
| To | 151248
|
| Strand | +
|
| General name | infC
|
| Definition | translation initiation factor IF3
|
| nt length | 606
|
| aa length | 201
|
| m.w. | 23144.89
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE9160 infC translation initiation factor IF3 1227452:1226940 | 119 | 1.0e-35
|
| mgen | WP_009885737.1 translation initiation factor IF-3 [Mycoplasma genitalium] | 288 | 1.6e-102
|
| mpul | WP_129690527.1 translation initiation factor IF-3 [Mycoplasma pulmonis] | 80 | 7.8e-21
|
| mmob | WP_011265149.1 translation initiation factor IF-3 [Mycoplasma mobile] | 86 | 7.5e-23
|
| mmyc | NP_975222.1 translation initiation factor IF-3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 95 | 1.3e-26
|
| mgal | WP_011113603.1 translation initiation factor IF-3 [Mycoplasma gallisepticum] | 153 | 8.0e-49
|
| uure | WP_004025505.1 translation initiation factor IF-3 [Ureaplasma urealyticum] | 128 | 2.5e-39
|
| bsub | NP_390765.1 initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. 168] | 104 | 2.4e-29
|
| cace | WP_010965658.1 MULTISPECIES: translation initiation factor IF-3 [Clostridium] | 89 | 1.5e-23
|
| ecoli | NP_416233.1 translation initiation factor IF-3 [Escherichia coli str. K-12 substr. MG1655] | 67 | 5.1e-15
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| IF3_N | 1 | Translation initiation factor IF-3, N-terminal domain | 37-105 | 68.9 | 3.4e-19
|
| IF3_C | 1 | Translation initiation factor IF-3, C-terminal domain | 113-194 | 51.5 | 7.4e-14
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874472.1| translation initiation factor IF-3 [Mycoplasma pneumoniae] | 201/201 (100%) | 1058 | 1.4e-145
|
| ref|WP_014325354.1| translation initiation factor IF-3 [Mycoplasma pneumoniae] | 200/201 (99%) | 1057 | 2.4e-145
|
| ref|WP_038534360.1| translation initiation factor IF-3 [Mycoplasma pneumoniae] | 200/201 (99%) | 1055 | 3.7e-145
|
| ref|WP_053344094.1| translation initiation factor IF-3 [Mycoplasma pneumoniae] | 200/201 (99%) | 1053 | 9.0e-145
|
| ref|WP_009885737.1| translation initiation factor IF-3 [Mycoplasma genitalium] | 139/183 (75%) | 737 | 5.5e-97
|
| ref|WP_014894620.1| translation initiation factor IF-3 [Mycoplasma genitalium] | 138/183 (75%) | 735 | 1.1e-96
|
| ref|WP_084269009.1| translation initiation factor IF-3 [Mycoplasma alvi] | 85/166 (51%) | 406 | 2.5e-46
|
| ref|WP_084266088.1| translation initiation factor IF-3 [Mycoplasma testudinis] | 80/174 (45%) | 393 | 2.4e-44
|
| ref|WP_051420946.1| translation initiation factor IF-3 [Mycoplasma imitans] | 83/182 (45%) | 388 | 9.3e-44
|
| ref|WP_151059713.1| translation initiation factor IF-3 [Mycoplasma gallisepticum] | 83/182 (45%) | 388 | 1.5e-43
|
Maintained by Jun Ishikawa