General features
| Gene ID | MPN106
|
| Type | CDS
|
| From | 136759
|
| To | 139176
|
| Strand | +
|
| General name | pheT
|
| Definition | phenylalanyl-tRNA synthetase beta chain
|
| nt length | 2418
|
| aa length | 805
|
| m.w. | 91713.15
|
| COG | ["J, R"]
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE9260 pheT phenylalanyl-tRNA synthetase subunit beta 1244337:1242034 | 248 | 1.8e-72
|
| mgen | WP_009885736.1 phenylalanine--tRNA ligase subunit beta [Mycoplasma genitalium] | 980 | 0.0e+00
|
| mpul | WP_010925151.1 phenylalanine--tRNA ligase subunit beta [Mycoplasma pulmonis] | 158 | 7.9e-42
|
| mmob | WP_011265036.1 phenylalanine--tRNA ligase subunit beta [Mycoplasma mobile] | 134 | 5.2e-34
|
| mmyc | NP_975576.1 phenylalanyl-tRNA synthetase subunit beta [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 119 | 2.9e-29
|
| mgal | WP_011113608.1 phenylalanine--tRNA ligase subunit beta [Mycoplasma gallisepticum] | 555 | 0.0e+00
|
| uure | WP_012560275.1 phenylalanine--tRNA ligase subunit beta [Ureaplasma urealyticum] | 300 | 8.6e-92
|
| bsub | NP_390741.1 phenylalanyl-tRNA synthetase (beta subunit) [Bacillus subtilis subsp. subtilis str. 168] | 172 | 9.0e-46
|
| cace | WP_010965653.1 MULTISPECIES: phenylalanine--tRNA ligase subunit beta [Clostridium] | 196 | 1.5e-53
|
| ecoli | NP_416228.1 phenylalanine--tRNA ligase subunit beta [Escherichia coli str. K-12 substr. MG1655] | 171 | 2.4e-45
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| B3_4 | 1 | B3/4 domain | 228-392 | 145.9 | 9e-43
|
| tRNA_synthFbeta | 1 | Phenylalanyl tRNA synthetase beta chain CLM domain | 495-694 | 104.7 | 4.5e-30
|
| tRNA_bind | 1 | Putative tRNA binding domain | 48-130 | 42.9 | 3.9e-11
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874463.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma pneumoniae] | 805/805 (100%) | 4272 | 0.0e+00
|
| ref|WP_053344175.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma pneumoniae] | 804/805 (99%) | 4262 | 0.0e+00
|
| ref|WP_014325346.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma pneumoniae] | 802/805 (99%) | 4261 | 0.0e+00
|
| ref|WP_159204482.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma pneumoniae] | 801/805 (99%) | 4256 | 0.0e+00
|
| ref|WP_159203173.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma pneumoniae] | 801/805 (99%) | 4255 | 0.0e+00
|
| ref|WP_053344068.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma pneumoniae] | 801/805 (99%) | 4255 | 0.0e+00
|
| ref|WP_159203656.1| phenylalanine--tRNA ligase subunit beta, partial [Mycoplasma pneumonia... | 772/777 (99%) | 4105 | 0.0e+00
|
| ref|WP_014894210.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma genitalium] | 477/805 (59%) | 2534 | 0.0e+00
|
| ref|WP_009885736.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma genitalium] | 476/805 (59%) | 2533 | 0.0e+00
|
| ref|WP_014893990.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma genitalium] | 476/805 (59%) | 2533 | 0.0e+00
|
Maintained by Jun Ishikawa