General features

Gene IDMYPE10350
TypeCDS
From1352425
To1351913
Strand-
General namerpoE
DefinitionDNA-directed RNA polymerase subunit delta
nt length513
aa length170
m.w.19589.65
COG[K] Transcription

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN024 rpoE DNA-directed RNA polymerase delta subunit 29804:30244555.1e-12
mgenWP_009885918.1 DNA-directed RNA polymerase subunit delta [Mycoplasma genitalium]561.1e-12
mgalWP_011113921.1 DNA-directed RNA polymerase subunit delta [Mycoplasma gallisepticum]584.4e-13
uureWP_004025977.1 DNA-directed RNA polymerase subunit delta [Ureaplasma urealyticum]673.1e-16
bsubNP_391597.1 RNA polymerase (delta subunit) and transcriptional repressor [Bacillus subtilis subsp. subtilis str. 168]332.5e-03

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis;

Pfam search result:

no hits.

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077848.1| DNA-directed RNA polymerase subunit delta [Mycoplasma penetrans]170/170 (100%)8412.0e-113
ref|WP_129374487.1| DNA-directed RNA polymerase subunit delta [Mycoplasma penetrans]166/170 (97%)8212.4e-110
ref|WP_004024627.1| DNA-directed RNA polymerase subunit delta [Mycoplasma iowae]84/162 (51%)3005.2e-31
ref|WP_036448540.1| DNA-directed RNA polymerase subunit delta [Mycoplasma pirum]39/97 (40%)1982.5e-16
ref|WP_052664002.1| DNA-directed RNA polymerase subunit delta [Mycoplasma alvi]43/99 (43%)1911.1e-15
ref|WP_006688513.1| DNA-directed RNA polymerase subunit delta [Ureaplasma parvum]50/121 (41%)1853.0e-14
ref|WP_016829140.1| DNA-directed RNA polymerase subunit delta [Ureaplasma urealyticum]38/94 (40%)1644.9e-11
ref|WP_004025977.1| DNA-directed RNA polymerase subunit delta [Ureaplasma urealyticum]38/94 (40%)1627.2e-11
ref|WP_027119778.1| DNA-directed RNA polymerase subunit delta [Mycoplasma testudinis]35/91 (38%)1617.9e-11
ref|WP_004026307.1| DNA-directed RNA polymerase subunit delta [Ureaplasma urealyticum]38/94 (40%)1601.7e-10

Maintained by Jun Ishikawa