General features

Gene IDMYPE10270
TypeCDS
From1341724
To1341227
Strand-
General name
Definition2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthetase
nt length498
aa length165
m.w.19019.92
COG[I] Lipid metabolism

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mmycNP_975024.1 prolipoprotein [Mycoplasma mycoides subsp. mycoides SC str. PG1]301.5e-02
mgalWP_011113253.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Mycoplasma gallisepticum]1112.4e-33
bsubNP_387972.1 2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase [Bacillus subtilis subsp. subtilis str. 168]837.6e-22
caceWP_010963756.1 MULTISPECIES: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Clostridium]733.8e-18
ecoliNP_417226.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Escherichia coli str. K-12 substr. MG1655]784.9e-20

*mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

YgbB1YgbB family17-158136.96.7e-40

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_044891324.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Mycoplasma pene...152/152 (100%)7583.0e-101
ref|WP_004024618.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Mycoplasma iowa...75/146 (51%)3573.6e-40
ref|WP_027123728.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Mycoplasma piru...68/150 (45%)3081.0e-32
ref|WP_020774861.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Leptospira alst...65/135 (48%)3021.1e-31
ref|WP_027119752.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Mycoplasma test...58/152 (38%)3011.1e-31
ref|WP_061220075.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Leptospira sant...63/135 (46%)2967.7e-31
ref|WP_046691123.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Leptospira sant...63/135 (46%)2951.3e-30
ref|WP_004469639.1| MULTISPECIES: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [L...63/135 (46%)2941.3e-30
ref|WP_004464311.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Leptospira sant...63/135 (46%)2941.4e-30
ref|WP_004480875.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Leptospira sant...63/135 (46%)2951.6e-30

Maintained by Jun Ishikawa