General features
| Gene ID | MYPE10190
|
| Type | CDS
|
| From | 1331504
|
| To | 1331115
|
| Strand | -
|
| General name | rpsJ
|
| Definition | ribosomal protein S10
|
| nt length | 390
|
| aa length | 129
|
| m.w. | 14952.42
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN164 rpsJ ribosomal protein S10 217630:217956 | 104 | 4.8e-32
|
| mgen | WP_009885835.1 30S ribosomal protein S10 [Mycoplasma genitalium] | 107 | 3.6e-33
|
| mpul | WP_010925391.1 30S ribosomal protein S10 [Mycoplasma pulmonis] | 100 | 2.2e-30
|
| mmob | WP_011264754.1 30S ribosomal protein S10 [Mycoplasma mobile] | 88 | 1.1e-25
|
| mmyc | NP_975722.1 30S ribosomal protein S10 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 118 | 3.3e-37
|
| mgal | WP_011113279.1 30S ribosomal protein S10 [Mycoplasma gallisepticum] | 130 | 9.8e-42
|
| uure | WP_012560201.1 30S ribosomal protein S10 [Ureaplasma urealyticum] | 132 | 6.8e-43
|
| phyt | WP_011160574.1 MULTISPECIES: 30S ribosomal protein S10 [Candidatus Phytoplasma asteris] | 112 | 3.8e-35
|
| bsub | NP_387996.1 ribosomal protein S10 (BS13); transcription antitermination factor [Bacillus subtilis subsp. subtilis str. 168] | 115 | 7.6e-36
|
| cace | WP_010966413.1 MULTISPECIES: 30S ribosomal protein S10 [Clostridium] | 113 | 9.6e-35
|
| ecoli | NP_417780.1 30S ribosomal subunit protein S10 [Escherichia coli str. K-12 substr. MG1655] | 114 | 5.7e-35
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_S10 | 1 | Ribosomal protein S10p/S20e | 33-127 | 104.0 | 3.7e-30
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_044891323.1| 30S ribosomal protein S10 [Mycoplasma penetrans] | 102/102 (100%) | 530 | 9.8e-68
|
| ref|WP_004024705.1| 30S ribosomal protein S10 [Mycoplasma iowae] | 89/101 (88%) | 471 | 9.5e-59
|
| ref|WP_038101566.1| 30S ribosomal protein S10 [Ureaplasma diversum] | 67/101 (66%) | 349 | 3.2e-40
|
| ref|WP_031489044.1| 30S ribosomal protein S10 [Ureaplasma canigenitalium] | 65/101 (64%) | 348 | 4.1e-40
|
| ref|WP_027120087.1| 30S ribosomal protein S10 [Mycoplasma testudinis] | 63/97 (64%) | 334 | 5.4e-38
|
| ref|WP_004026678.1| 30S ribosomal protein S10 [Ureaplasma urealyticum] | 62/97 (63%) | 333 | 1.0e-37
|
| ref|WP_004025692.1| MULTISPECIES: 30S ribosomal protein S10 [Ureaplasma] | 62/97 (63%) | 332 | 1.2e-37
|
| ref|WP_012560201.1| 30S ribosomal protein S10 [Ureaplasma urealyticum] | 62/97 (63%) | 331 | 1.6e-37
|
| ref|WP_081275332.1| 30S ribosomal protein S10 [Mycoplasma gallisepticum] | 64/99 (64%) | 330 | 4.7e-37
|
| ref|WP_030003811.1| 30S ribosomal protein S10 [Acholeplasma palmae] | 61/96 (63%) | 328 | 5.4e-37
|
Maintained by Jun Ishikawa