General features
| Gene ID | MYPE10160
|
| Type | CDS
|
| From | 1329522
|
| To | 1329106
|
| Strand | -
|
| General name | rplW
|
| Definition | ribosomal protein L23
|
| nt length | 417
|
| aa length | 138
|
| m.w. | 15827.45
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN167 rplW ribosomal protein L23 219474:220187 | 97 | 9.5e-28
|
| mgen | WP_009885837.1 50S ribosomal protein L23 [Mycoplasma genitalium] | 98 | 2.1e-29
|
| mpul | WP_010925387.1 50S ribosomal protein L23 [Mycoplasma pulmonis] | 52 | 6.1e-11
|
| mmob | WP_011264757.1 50S ribosomal protein L23 [Mycoplasma mobile] | 48 | 1.4e-09
|
| mmyc | NP_975719.1 50S ribosomal protein L23 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 38 | 4.9e-06
|
| mgal | WP_011113282.1 50S ribosomal protein L23 [Mycoplasma gallisepticum] | 91 | 2.0e-26
|
| uure | WP_004025740.1 50S ribosomal protein L23 [Ureaplasma urealyticum] | 90 | 2.5e-26
|
| phyt | WP_011160577.1 MULTISPECIES: 50S ribosomal protein L23 [Candidatus Phytoplasma asteris] | 30 | 2.3e-03
|
| bsub | NP_387999.2 ribosomal protein L23 [Bacillus subtilis subsp. subtilis str. 168] | 53 | 3.4e-11
|
| cace | WP_010966410.1 MULTISPECIES: 50S ribosomal protein L23 [Clostridium] | 33 | 6.0e-04
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L23 | 1 | Ribosomal protein L23 | 6-92 | 74.7 | 5.8e-21
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077829.1| 50S ribosomal protein L23 [Mycoplasma penetrans] | 138/138 (100%) | 695 | 3.4e-92
|
| ref|WP_004024702.1| 50S ribosomal protein L23 [Mycoplasma iowae] | 70/94 (74%) | 382 | 6.0e-45
|
| ref|WP_031489041.1| 50S ribosomal protein L23 [Ureaplasma canigenitalium] | 50/99 (50%) | 256 | 6.3e-26
|
| ref|WP_027120089.1| 50S ribosomal protein L23 [Mycoplasma testudinis] | 50/96 (52%) | 257 | 7.6e-26
|
| ref|WP_009885837.1| 50S ribosomal protein L23 [Mycoplasma genitalium] | 47/106 (44%) | 243 | 6.9e-24
|
| ref|WP_033160176.1| 50S ribosomal protein L23 [Mycoplasma alvi] | 55/106 (51%) | 236 | 7.8e-23
|
| ref|WP_027124218.1| 50S ribosomal protein L23 [Mycoplasma pirum] | 56/109 (51%) | 236 | 8.2e-23
|
| ref|WP_159203813.1| 50S ribosomal protein L23, partial [Mycoplasma pneumoniae] | 50/110 (45%) | 242 | 1.3e-22
|
| ref|WP_159204522.1| 50S ribosomal protein L23 [Mycoplasma pneumoniae] | 50/110 (45%) | 241 | 2.2e-22
|
| ref|WP_159201926.1| 50S ribosomal protein L23 [Mycoplasma pneumoniae] | 50/110 (45%) | 242 | 2.4e-22
|
Maintained by Jun Ishikawa