General features
| Gene ID | MYPE10150
|
| Type | CDS
|
| From | 1329071
|
| To | 1328232
|
| Strand | -
|
| General name | rplB
|
| Definition | ribosomal protein L2
|
| nt length | 840
|
| aa length | 279
|
| m.w. | 30836.43
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN168 rplB ribosomal protein L2 220187:221050 | 391 | 4.2e-140
|
| mgen | WP_009885838.1 50S ribosomal protein L2 [Mycoplasma genitalium] | 387 | 1.3e-138
|
| mpul | WP_010925386.1 50S ribosomal protein L2 [Mycoplasma pulmonis] | 343 | 2.6e-121
|
| mmob | WP_011264758.1 50S ribosomal protein L2 [Mycoplasma mobile] | 333 | 1.9e-117
|
| mmyc | NP_975718.1 50S ribosomal protein L2 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 344 | 1.2e-121
|
| mgal | WP_011113283.1 50S ribosomal protein L2 [Mycoplasma gallisepticum] | 393 | 7.2e-141
|
| uure | WP_012560226.1 50S ribosomal protein L2 [Ureaplasma urealyticum] | 415 | 8.8e-150
|
| phyt | WP_011160578.1 50S ribosomal protein L2 [Onion yellows phytoplasma] | 326 | 9.3e-115
|
| bsub | NP_388000.2 ribosomal protein L2 (BL2) [Bacillus subtilis subsp. subtilis str. 168] | 328 | 7.6e-115
|
| cace | WP_010966409.1 MULTISPECIES: 50S ribosomal protein L2 [Clostridium] | 321 | 7.2e-112
|
| ecoli | NP_417776.1 50S ribosomal subunit protein L2 [Escherichia coli str. K-12 substr. MG1655] | 262 | 9.3e-89
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L2_C | 1 | Ribosomal Proteins L2, C-terminal domain | 127-255 | 180.8 | 1.1e-53
|
| Ribosomal_L2 | 1 | Ribosomal Proteins L2, RNA binding domain | 43-118 | 107.4 | 2.5e-31
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077828.1| 50S ribosomal protein L2 [Mycoplasma penetrans] | 279/279 (100%) | 1445 | 0.0e+00
|
| ref|WP_004024701.1| 50S ribosomal protein L2 [Mycoplasma iowae] | 240/279 (86%) | 1291 | 1.9e-178
|
| ref|WP_004025838.1| MULTISPECIES: 50S ribosomal protein L2 [Ureaplasma] | 200/279 (71%) | 1073 | 2.7e-145
|
| ref|WP_038101557.1| 50S ribosomal protein L2 [Ureaplasma diversum] | 198/279 (70%) | 1071 | 4.9e-145
|
| ref|WP_031489040.1| 50S ribosomal protein L2 [Ureaplasma canigenitalium] | 200/279 (71%) | 1071 | 6.2e-145
|
| ref|WP_006688951.1| 50S ribosomal protein L2 [Ureaplasma parvum] | 200/279 (71%) | 1069 | 1.1e-144
|
| ref|WP_012560226.1| 50S ribosomal protein L2 [Ureaplasma urealyticum] | 199/279 (71%) | 1067 | 2.1e-144
|
| ref|WP_027124217.1| 50S ribosomal protein L2 [Mycoplasma pirum] | 199/278 (71%) | 1041 | 2.3e-140
|
| ref|WP_033160177.1| 50S ribosomal protein L2 [Mycoplasma alvi] | 197/278 (70%) | 1036 | 1.1e-139
|
| ref|WP_011113283.1| 50S ribosomal protein L2 [Mycoplasma gallisepticum] | 188/278 (67%) | 1009 | 1.5e-135
|
Maintained by Jun Ishikawa