General features
| Gene ID | MYPE10100
|
| Type | CDS
|
| From | 1326466
|
| To | 1325732
|
| Strand | -
|
| General name | rpmC
|
| Definition | ribosomal protein L29
|
| nt length | 735
|
| aa length | 244
|
| m.w. | 26030.57
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN173 rpmC ribosomal protein L29 223036:223371 | 53 | 3.6e-11
|
| mgen | WP_009885843.1 50S ribosomal protein L29 [Mycoplasma genitalium] | 63 | 3.9e-14
|
| mpul | WP_010925380.1 50S ribosomal protein L29 [Mycoplasma pulmonis] | 40 | 1.1e-06
|
| mmob | WP_011264763.1 50S ribosomal protein L29 [Mycoplasma mobile] | 39 | 2.0e-06
|
| mmyc | NP_975713.1 50S ribosomal protein L29 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 33 | 1.6e-03
|
| mgal | WP_011113288.1 50S ribosomal protein L29 [Mycoplasma gallisepticum] | 75 | 8.5e-19
|
| uure | WP_004026203.1 MULTISPECIES: 50S ribosomal protein L29 [Ureaplasma] | 61 | 3.1e-14
|
| phyt | WP_011160583.1 50S ribosomal protein L29 [Onion yellows phytoplasma] | 42 | 2.4e-07
|
| bsub | NP_388005.1 ribosomal protein L29 [Bacillus subtilis subsp. subtilis str. 168] | 40 | 5.1e-06
|
| cace | WP_010966404.1 MULTISPECIES: 50S ribosomal protein L29 [Clostridium] | 44 | 1.3e-07
|
| ecoli | NP_417771.1 50S ribosomal subunit protein L29 [Escherichia coli str. K-12 substr. MG1655] | 23 | 4.3e+00
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L29 | 1 | Ribosomal L29 protein | 5-61 | 52.1 | 4.6e-14
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_052270432.1| 50S ribosomal protein L29 [Mycoplasma penetrans] | 242/242 (100%) | 1167 | 8.3e-161
|
| ref|WP_004024696.1| 50S ribosomal protein L29 [Mycoplasma iowae] | 83/151 (54%) | 327 | 2.0e-34
|
| ref|WP_036452078.1| 50S ribosomal protein L1 [Mycoplasma iowae] | 78/143 (54%) | 191 | 6.1e-13
|
| ref|WP_129692708.1| 50S ribosomal protein L1 [Mycoplasma iowae] | 67/117 (57%) | 184 | 6.3e-12
|
| ref|XP_022535099.1| mucin-1-like [Astyanax mexicanus] | 55/110 (50%) | 161 | 5.6e-09
|
Maintained by Jun Ishikawa