General features
| Gene ID | MYPE10080
|
| Type | CDS
|
| From | 1324457
|
| To | 1324182
|
| Strand | -
|
| General name | rpsQ
|
| Definition | ribosomal protein S17
|
| nt length | 276
|
| aa length | 91
|
| m.w. | 10816.70
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN174 rpsQ ribosomal protein S17 223371:223628 | 88 | 2.0e-26
|
| mgen | WP_009885844.1 30S ribosomal protein S17 [Mycoplasma genitalium] | 79 | 3.5e-23
|
| mpul | WP_010925379.1 30S ribosomal protein S17 [Mycoplasma pulmonis] | 77 | 6.7e-22
|
| mmob | WP_011264764.1 30S ribosomal protein S17 [Mycoplasma mobile] | 88 | 1.4e-26
|
| mmyc | NP_975712.1 30S ribosomal protein S17 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 88 | 2.6e-26
|
| mgal | WP_011113289.1 30S ribosomal protein S17 [Mycoplasma gallisepticum] | 110 | 5.7e-35
|
| uure | WP_004025503.1 MULTISPECIES: 30S ribosomal protein S17 [Ureaplasma] | 124 | 8.6e-41
|
| phyt | WP_011160584.1 MULTISPECIES: 30S ribosomal protein S17 [Candidatus Phytoplasma] | 84 | 5.2e-25
|
| bsub | NP_388006.1 ribosomal protein S17 (BS16) [Bacillus subtilis subsp. subtilis str. 168] | 94 | 5.1e-28
|
| cace | WP_010966403.1 MULTISPECIES: 30S ribosomal protein S17 [Clostridium] | 90 | 1.3e-26
|
| ecoli | NP_417770.1 30S ribosomal subunit protein S17 [Escherichia coli str. K-12 substr. MG1655] | 88 | 6.6e-26
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_S17 | 1 | Ribosomal protein S17 | 18-83 | 111.6 | 1.4e-32
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077822.1| 30S ribosomal protein S17 [Mycoplasma penetrans] | 91/91 (100%) | 469 | 3.1e-59
|
| ref|WP_004024695.1| 30S ribosomal protein S17 [Mycoplasma iowae] | 70/81 (86%) | 368 | 5.0e-44
|
| ref|WP_004025503.1| MULTISPECIES: 30S ribosomal protein S17 [Ureaplasma] | 55/81 (67%) | 312 | 2.0e-35
|
| ref|WP_051749346.1| 30S ribosomal protein S17 [Ureaplasma diversum] | 55/81 (67%) | 306 | 1.9e-34
|
| ref|WP_122819262.1| 30S ribosomal protein S17 [Varibaculum vaginae] | 54/85 (63%) | 278 | 3.4e-30
|
| ref|WP_031489034.1| 30S ribosomal protein S17 [Ureaplasma canigenitalium] | 55/81 (67%) | 277 | 3.8e-30
|
| ref|WP_077685926.1| 30S ribosomal protein S17 [Tessaracoccus aquimaris] | 55/91 (60%) | 277 | 5.3e-30
|
| ref|WP_011113289.1| 30S ribosomal protein S17 [Mycoplasma gallisepticum] | 54/79 (68%) | 274 | 1.2e-29
|
| ref|WP_022864269.1| MULTISPECIES: 30S ribosomal protein S17 [Varibaculum] | 53/85 (62%) | 274 | 1.8e-29
|
| ref|WP_027122184.1| 30S ribosomal protein S17 [Mycoplasma imitans] | 53/79 (67%) | 272 | 2.8e-29
|
Maintained by Jun Ishikawa