General features
| Gene ID | MYPE10050
|
| Type | CDS
|
| From | 1323438
|
| To | 1322875
|
| Strand | -
|
| General name | rplE
|
| Definition | ribosomal protein L5
|
| nt length | 564
|
| aa length | 187
|
| m.w. | 21202.79
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN177 rplE ribosomal protein L5 224338:224880 | 231 | 5.6e-80
|
| mgen | WP_009885847.1 50S ribosomal protein L5 [Mycoplasma genitalium] | 241 | 4.5e-84
|
| mpul | WP_010925376.1 50S ribosomal protein L5 [Mycoplasma pulmonis] | 221 | 4.3e-76
|
| mmob | WP_011264767.1 50S ribosomal protein L5 [Mycoplasma mobile] | 192 | 9.5e-65
|
| mmyc | NP_975708.1 50S ribosomal protein L5 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 232 | 3.0e-80
|
| mgal | WP_011113292.1 50S ribosomal protein L5 [Mycoplasma gallisepticum] | 237 | 2.7e-82
|
| uure | WP_004025603.1 50S ribosomal protein L5 [Ureaplasma urealyticum] | 235 | 1.5e-81
|
| phyt | WP_034172278.1 MULTISPECIES: 50S ribosomal protein L5 [Candidatus Phytoplasma asteris] | 198 | 3.6e-67
|
| bsub | NP_388009.1 ribosomal protein L5 (BL6) [Bacillus subtilis subsp. subtilis str. 168] | 231 | 2.0e-79
|
| cace | WP_010966400.1 MULTISPECIES: 50S ribosomal protein L5 [Clostridium] | 222 | 1.0e-75
|
| ecoli | NP_417767.1 50S ribosomal subunit protein L5 [Escherichia coli str. K-12 substr. MG1655] | 214 | 7.4e-73
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L5_C | 1 | ribosomal L5P family C-terminus | 88-180 | 137.3 | 1.5e-40
|
| Ribosomal_L5 | 1 | Ribosomal protein L5 | 28-83 | 82.7 | 1.7e-23
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077819.1| 50S ribosomal protein L5 [Mycoplasma penetrans] | 187/187 (100%) | 961 | 2.7e-131
|
| ref|WP_004024692.1| 50S ribosomal protein L5 [Mycoplasma iowae] | 152/187 (81%) | 806 | 1.3e-107
|
| ref|WP_077139638.1| MULTISPECIES: 50S ribosomal protein L5 [Staphylococcaceae] | 110/176 (62%) | 615 | 1.2e-78
|
| ref|WP_009885847.1| 50S ribosomal protein L5 [Mycoplasma genitalium] | 110/172 (63%) | 615 | 1.5e-78
|
| ref|WP_004801816.1| 50S ribosomal protein L5 [Eggerthia catenaformis] | 110/176 (62%) | 614 | 2.1e-78
|
| ref|WP_059107575.1| 50S ribosomal protein L5 [Staphylococcus auricularis] | 110/176 (62%) | 613 | 2.7e-78
|
| ref|WP_008406951.1| MULTISPECIES: 50S ribosomal protein L5 [Solibacillus] | 112/178 (62%) | 612 | 3.3e-78
|
| ref|WP_014894186.1| 50S ribosomal protein L5 [Mycoplasma genitalium] | 110/172 (63%) | 612 | 4.4e-78
|
| ref|WP_055234193.1| 50S ribosomal protein L5 [Catenibacterium mitsuokai] | 113/176 (64%) | 611 | 4.8e-78
|
| ref|WP_094926407.1| 50S ribosomal protein L5 [Lottiidibacillus patelloidae] | 112/176 (63%) | 611 | 5.1e-78
|
Maintained by Jun Ishikawa