General features
| Gene ID | MPN074
|
| Type | CDS
|
| From | 88341
|
| To | 87898
|
| Strand | -
|
| General name |
|
| Definition | hypothetical protein
|
| nt length | 444
|
| aa length | 147
|
| m.w. | 17086.97
|
| COG | [O] Posttranslational modification, protein turnover, chaperones
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE3530 smpB tmRNA-binding small protein B 455952:456392 | 113 | 1.8e-34
|
| mgen | WP_009885724.1 SsrA-binding protein [Mycoplasma genitalium] | 209 | 1.8e-72
|
| mpul | WP_010925156.1 SsrA-binding protein [Mycoplasma pulmonis] | 70 | 5.0e-18
|
| mmob | WP_011264784.1 SsrA-binding protein SmpB [Mycoplasma mobile] | 97 | 1.8e-28
|
| mmyc | NP_975827.1 SsrA-binding protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 105 | 2.7e-31
|
| mgal | WP_011113692.1 SsrA-binding protein [Mycoplasma gallisepticum] | 128 | 1.4e-40
|
| uure | WP_004025890.1 SsrA-binding protein SmpB [Ureaplasma urealyticum] | 99 | 3.6e-29
|
| phyt | WP_034172232.1 MULTISPECIES: SsrA-binding protein SmpB [Candidatus Phytoplasma asteris] | 103 | 1.2e-30
|
| bsub | NP_391240.1 tmRNA-binding protein [Bacillus subtilis subsp. subtilis str. 168] | 115 | 9.9e-35
|
| cace | WP_010964035.1 MULTISPECIES: SsrA-binding protein SmpB [Clostridium] | 96 | 2.5e-27
|
| ecoli | NP_417110.1 SsrA-binding protein [Escherichia coli str. K-12 substr. MG1655] | 86 | 2.5e-23
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| SmpB | 1 | SmpB protein | 5-143 | 155.4 | 8.5e-46
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874431.1| SsrA-binding protein [Mycoplasma pneumoniae] | 147/147 (100%) | 768 | 4.0e-103
|
| ref|WP_098363679.1| SsrA-binding protein [Mycoplasma pneumoniae] | 146/147 (99%) | 761 | 4.4e-102
|
| ref|WP_009885724.1| SsrA-binding protein [Mycoplasma genitalium] | 95/144 (65%) | 531 | 6.0e-67
|
| ref|WP_014894123.1| SsrA-binding protein [Mycoplasma genitalium] | 95/144 (65%) | 526 | 2.7e-66
|
| ref|WP_106012213.1| SsrA-binding protein SmpB [Fastidiosipila sanguinis] | 62/140 (44%) | 344 | 1.8e-38
|
| ref|WP_106182125.1| SsrA-binding protein SmpB [Prauserella shujinwangii] | 64/144 (44%) | 344 | 2.1e-38
|
| ref|WP_068267557.1| SsrA-binding protein SmpB [Caviibacter abscessus] | 71/142 (50%) | 341 | 3.8e-38
|
| ref|WP_092528244.1| SsrA-binding protein SmpB [Yuhushiella deserti] | 63/144 (43%) | 341 | 6.9e-38
|
| ref|WP_144645980.1| SsrA-binding protein SmpB [Amycolatopsis acidiphila] | 61/144 (42%) | 337 | 2.1e-37
|
| ref|WP_027944799.1| SsrA-binding protein SmpB [Amycolatopsis taiwanensis] | 62/144 (43%) | 336 | 2.9e-37
|
Maintained by Jun Ishikawa