General features
| Gene ID | MPN071
|
| Type | CDS
|
| From | 86428
|
| To | 85598
|
| Strand | -
|
| General name | yabC
|
| Definition | hypothetical protein
|
| nt length | 831
|
| aa length | 276
|
| m.w. | 31061.72
|
| COG | [R] General function prediction only
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE1400 predicted methyltransferase 168317:169165 | 188 | 2.5e-60
|
| mgen | WP_009885721.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma genitalium] | 360 | 4.1e-128
|
| mpul | WP_010924858.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma pulmonis] | 114 | 1.3e-32
|
| mmob | WP_011265045.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma mobile] | 109 | 1.6e-30
|
| mmyc | NP_975548.1 tetrapyrrole methylas family protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 135 | 1.7e-39
|
| mgal | WP_011113779.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma gallisepticum] | 197 | 4.4e-64
|
| uure | WP_004025806.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Ureaplasma urealyticum] | 215 | 6.3e-71
|
| phyt | WP_011160607.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Onion yellows phytoplasma] | 115 | 1.4e-32
|
| bsub | NP_387917.1 16S rRNA 2'-O-ribose C1402 methyltransferase [Bacillus subtilis subsp. subtilis str. 168] | 108 | 6.6e-29
|
| cace | WP_010963630.1 MULTISPECIES: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Clostridium] | 133 | 2.3e-38
|
| ecoli | NP_417615.1 16S rRNA 2'-O-ribose C1402 methyltransferase [Escherichia coli str. K-12 substr. MG1655] | 101 | 2.4e-26
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| TP_methylase | 1 | Tetrapyrrole (Corrin/Porphyrin) Methylases | 5-199 | 58.4 | 9.4e-16
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874428.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma pneumonia... | 276/276 (100%) | 1460 | 0.0e+00
|
| ref|WP_014325321.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma pneumonia... | 275/276 (99%) | 1459 | 0.0e+00
|
| ref|WP_086132710.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma pneumonia... | 275/276 (99%) | 1457 | 0.0e+00
|
| ref|WP_019830475.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma pneumonia... | 274/276 (99%) | 1454 | 0.0e+00
|
| ref|WP_014893909.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma genitaliu... | 172/275 (62%) | 924 | 1.3e-122
|
| ref|WP_009885721.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma genitaliu... | 172/275 (62%) | 923 | 1.4e-122
|
| ref|WP_027119586.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma testudini... | 115/266 (43%) | 596 | 8.1e-73
|
| ref|WP_027123768.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma pirum] | 115/268 (42%) | 582 | 9.0e-71
|
| ref|WP_031489093.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Ureaplasma canigenit... | 121/273 (44%) | 569 | 8.0e-69
|
| ref|WP_033159940.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Mycoplasma alvi] | 109/269 (40%) | 568 | 1.0e-68
|
Maintained by Jun Ishikawa