General features
| Gene ID | MPN064
|
| Type | CDS
|
| From | 80414
|
| To | 81679
|
| Strand | +
|
| General name | deoA
|
| Definition | thymidine phosphorylase
|
| nt length | 1266
|
| aa length | 421
|
| m.w. | 46627.81
|
| COG | [F] Nucleotide transport and metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE1050 deoA thymidine phosphorylase 130032:131333 | 311 | 3.1e-104
|
| mgen | WP_009885713.1 thymidine phosphorylase [Mycoplasma genitalium] | 588 | 0.0e+00
|
| mpul | WP_010925447.1 thymidine phosphorylase [Mycoplasma pulmonis] | 341 | 6.2e-116
|
| mmob | WP_011265056.1 thymidine phosphorylase [Mycoplasma mobile] | 274 | 4.7e-90
|
| mmyc | NP_975803.1 thymidine phosphorylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 290 | 8.2e-96
|
| mgal | WP_011113841.1 thymidine phosphorylase [Mycoplasma gallisepticum] | 409 | 7.4e-143
|
| uure | WP_004027212.1 thymidine phosphorylase [Ureaplasma urealyticum] | 326 | 4.4e-110
|
| bsub | NP_391819.2 pyrimidine-nucleoside phosphorylase [Bacillus subtilis subsp. subtilis str. 168] | 303 | 1.8e-100
|
| cace | WP_010964854.1 MULTISPECIES: pyrimidine-nucleoside phosphorylase [Clostridium] | 295 | 3.2e-97
|
| ecoli | NP_418799.1 thymidine phosphorylase [Escherichia coli str. K-12 substr. MG1655] | 214 | 8.0e-66
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Glycos_transf_3 | 1 | Glycosyl transferase family, a/b domain | 78-267 | 96.9 | 1.4e-27
|
| PYNP_C | 1 | Pyrimidine nucleoside phosphorylase C-terminal domain | 348-419 | 69.6 | 1.3e-19
|
| Glycos_trans_3N | 1 | Glycosyl transferase family, helical bundle domain | 5-66 | 68.1 | 4.2e-19
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874421.1| thymidine phosphorylase [Mycoplasma pneumoniae] | 421/421 (100%) | 2242 | 0.0e+00
|
| ref|WP_054175895.1| thymidine phosphorylase [Mycoplasma pneumoniae] | 420/421 (99%) | 2238 | 0.0e+00
|
| ref|WP_159203438.1| thymidine phosphorylase [Mycoplasma pneumoniae] | 420/421 (99%) | 2235 | 0.0e+00
|
| ref|WP_014325318.1| thymidine phosphorylase [Mycoplasma pneumoniae] | 420/421 (99%) | 2231 | 0.0e+00
|
| ref|WP_086137856.1| thymidine phosphorylase [Mycoplasma pneumoniae] | 419/421 (99%) | 2226 | 0.0e+00
|
| ref|WP_159201599.1| thymidine phosphorylase [Mycoplasma pneumoniae] | 419/421 (99%) | 2226 | 0.0e+00
|
| ref|WP_009885713.1| thymidine phosphorylase [Mycoplasma genitalium] | 284/421 (67%) | 1515 | 0.0e+00
|
| ref|WP_014894120.1| thymidine phosphorylase [Mycoplasma genitalium] | 284/421 (67%) | 1512 | 0.0e+00
|
| ref|WP_014893908.1| thymidine phosphorylase [Mycoplasma genitalium] | 284/421 (67%) | 1512 | 0.0e+00
|
| ref|WP_014894367.1| thymidine phosphorylase [Mycoplasma genitalium] | 283/421 (67%) | 1476 | 0.0e+00
|
Maintained by Jun Ishikawa