General features
| Gene ID | MPN051
|
| Type | CDS
|
| From | 64648
|
| To | 63494
|
| Strand | -
|
| General name | glpD
|
| Definition | glycerol-3-phospate dehydrogenase
|
| nt length | 1155
|
| aa length | 384
|
| m.w. | 42724.20
|
| COG | [R] General function prediction only
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE6370 glpA glycerol-3-phosphate dehydrogenase 815902:814757 | 326 | 2.5e-111
|
| mgen | WP_010869301.1 type 2 glycerol-3-phosphate oxidase [Mycoplasma genitalium] | 493 | 2.5e-177
|
| mpul | WP_010925068.1 type 2 glycerol-3-phosphate oxidase [Mycoplasma pulmonis] | 333 | 6.7e-114
|
| mmob | WP_011264815.1 type 2 glycerol-3-phosphate oxidase [Mycoplasma mobile] | 296 | 1.3e-99
|
| mmyc | NP_975258.1 glycerol-3-phospate oxidase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 279 | 6.9e-93
|
| mgal | WP_011113245.1 type 2 glycerol-3-phosphate oxidase [Mycoplasma gallisepticum] | 335 | 7.6e-115
|
| bsub | NP_389049.1 FAD-dependent glycine oxidase [Bacillus subtilis subsp. subtilis str. 168] | 45 | 2.2e-06
|
| cace | WP_010964632.1 MULTISPECIES: NAD(P)/FAD-dependent oxidoreductase [Clostridium] | 182 | 4.2e-54
|
| ecoli | NP_417146.2 L-2-hydroxyglutarate oxidase [Escherichia coli str. K-12 substr. MG1655] | 70 | 2.3e-14
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| DAO | 1 | FAD dependent oxidoreductase | 5-359 | 202.6 | 1.3e-59
|
| Pyr_redox | 1 | Pyridine nucleotide-disulphide oxidoreductase | 6-39 | 38.5 | 1.3e-09
|
| FAD_binding_2 | 1 | FAD binding domain | 5-217 | 31.9 | 7.4e-08
|
| NAD_binding_8 | 1 | NAD(P)-binding Rossmann-like domain | 8-39 | 32.0 | 1.1e-07
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874408.1| type 2 glycerol-3-phosphate oxidase [Mycoplasma pneumoniae] | 384/384 (100%) | 2055 | 0.0e+00
|
| ref|WP_015344867.1| type 2 glycerol-3-phosphate oxidase [Mycoplasma pneumoniae] | 383/384 (99%) | 2051 | 0.0e+00
|
| ref|WP_014325310.1| type 2 glycerol-3-phosphate oxidase [Mycoplasma pneumoniae] | 381/384 (99%) | 2049 | 0.0e+00
|
| ref|WP_010869301.1| type 2 glycerol-3-phosphate oxidase [Mycoplasma genitalium] | 240/384 (62%) | 1270 | 8.4e-172
|
| ref|WP_014894112.1| type 2 glycerol-3-phosphate oxidase [Mycoplasma genitalium] | 238/384 (61%) | 1264 | 6.7e-171
|
| ref|WP_146367394.1| type 2 glycerol-3-phosphate oxidase [Mycoplasma anserisalpingitidis] | 182/381 (47%) | 935 | 4.5e-121
|
| ref|WP_146368522.1| type 2 glycerol-3-phosphate oxidase [Mycoplasma anserisalpingitidis] | 182/381 (47%) | 935 | 4.9e-121
|
| ref|WP_006886292.1| type 2 glycerol-3-phosphate oxidase [Mycoplasma anatis] | 183/381 (48%) | 933 | 8.5e-121
|
| ref|WP_158763652.1| type 2 glycerol-3-phosphate oxidase [Mycoplasma sp. NEAQ87857] | 180/381 (47%) | 923 | 2.9e-119
|
| ref|WP_146308533.1| type 2 glycerol-3-phosphate oxidase [Mycoplasma anserisalpingitidis] | 181/381 (47%) | 922 | 4.0e-119
|
Maintained by Jun Ishikawa