General features
| Gene ID | MPN046
|
| Type | CDS
|
| From | 54293
|
| To | 55966
|
| Strand | +
|
| General name | aspS
|
| Definition | aspartyl-tRNA synthetase
|
| nt length | 1674
|
| aa length | 557
|
| m.w. | 64113.55
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE2870 aspS aspartyl-tRNA synthetase 375348:377090 | 418 | 6.3e-142
|
| mgen | WP_009885700.1 aspartate--tRNA ligase [Mycoplasma genitalium] | 831 | 0.0e+00
|
| mpul | WP_041364038.1 aspartate--tRNA ligase [Mycoplasma pulmonis] | 378 | 1.1e-126
|
| mmob | WP_011264794.1 aspartate--tRNA ligase [Mycoplasma mobile] | 380 | 1.2e-127
|
| mmyc | NP_975331.1 aspartyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 423 | 6.4e-144
|
| mgal | WP_011113417.1 aspartate--tRNA ligase [Mycoplasma gallisepticum] | 495 | 2.9e-172
|
| uure | WP_004025780.1 aspartate--tRNA ligase [Ureaplasma urealyticum] | 449 | 1.9e-154
|
| phyt | WP_011160503.1 aspartate--tRNA(Asp/Asn) ligase [Onion yellows phytoplasma] | 328 | 2.0e-107
|
| bsub | NP_390633.1 aspartyl-tRNA synthetase, promiscuous (also recognizes tRNAasn) [Bacillus subtilis subsp. subtilis str. 168] | 407 | 7.4e-137
|
| cace | WP_010965567.1 MULTISPECIES: aspartate--tRNA ligase [Clostridium] | 398 | 2.1e-133
|
| ecoli | NP_416380.1 aspartate--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 359 | 1.6e-118
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA-synt_2 | 1 | tRNA synthetases class II (D, K and N) | 115-528 | 322.8 | 2e-96
|
| tRNA_anti-codon | 1 | OB-fold nucleic acid binding domain | 27-96 | 46.1 | 3.7e-12
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874403.1| aspartate--tRNA ligase [Mycoplasma pneumoniae] | 557/557 (100%) | 2994 | 0.0e+00
|
| ref|WP_159203236.1| aspartate--tRNA ligase [Mycoplasma pneumoniae] | 556/557 (99%) | 2988 | 0.0e+00
|
| ref|WP_009885700.1| aspartate--tRNA ligase [Mycoplasma genitalium] | 386/557 (69%) | 2147 | 0.0e+00
|
| ref|WP_014894363.1| aspartate--tRNA ligase [Mycoplasma genitalium] | 386/557 (69%) | 2145 | 0.0e+00
|
| ref|WP_014894110.1| aspartate--tRNA ligase [Mycoplasma genitalium] | 385/557 (69%) | 2142 | 0.0e+00
|
| ref|WP_014894541.1| aspartate--tRNA ligase [Mycoplasma genitalium] | 385/557 (69%) | 2141 | 0.0e+00
|
| ref|WP_159203628.1| aspartate--tRNA ligase, partial [Mycoplasma pneumoniae] | 308/308 (100%) | 1637 | 0.0e+00
|
| ref|WP_156933129.1| aspartate--tRNA ligase [Mycoplasma testudinis] | 270/534 (50%) | 1370 | 0.0e+00
|
| ref|WP_036448952.1| aspartate--tRNA ligase [Mycoplasma pirum] | 266/533 (49%) | 1337 | 2.6e-176
|
| ref|WP_052664054.1| aspartate--tRNA ligase [Mycoplasma alvi] | 270/537 (50%) | 1314 | 1.0e-172
|
Maintained by Jun Ishikawa