General features
| Gene ID | MPN026
|
| Type | CDS
|
| From | 31111
|
| To | 32199
|
| Strand | +
|
| General name | yyaF
|
| Definition | GTPase-like protein
|
| nt length | 1089
|
| aa length | 362
|
| m.w. | 40606.52
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10330 YchF GTPase 1350868:1349771 | 377 | 8.5e-132
|
| mgen | WP_009885916.1 redox-regulated ATPase YchF [Mycoplasma genitalium] | 543 | 0.0e+00
|
| mpul | WP_041363939.1 redox-regulated ATPase YchF [Mycoplasma pulmonis] | 323 | 1.2e-110
|
| mmob | WP_011265122.1 redox-regulated ATPase YchF [Mycoplasma mobile] | 311 | 2.8e-106
|
| mmyc | NP_975883.1 GTP-dependent nucleic acid-binding protein EngD [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 348 | 1.4e-120
|
| mgal | WP_011113923.1 redox-regulated ATPase YchF [Mycoplasma gallisepticum] | 353 | 1.1e-122
|
| uure | WP_004025983.1 redox-regulated ATPase YchF [Ureaplasma urealyticum] | 384 | 7.2e-135
|
| phyt | WP_011160558.1 MULTISPECIES: redox-regulated ATPase YchF [Candidatus Phytoplasma asteris] | 313 | 5.4e-107
|
| bsub | NP_391972.1 potassium-dependent informational ATPase interacting with 70S ribosome; ROS stress regulator [Bacillus subtilis subsp. subtilis str. 168] | 341 | 3.9e-117
|
| cace | WP_010965433.1 MULTISPECIES: redox-regulated ATPase YchF [Clostridium] | 311 | 1.1e-105
|
| ecoli | NP_415721.1 redox-responsive ATPase YchF [Escherichia coli str. K-12 substr. MG1655] | 315 | 4.2e-107
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| YchF-GTPase_C | 1 | Protein of unknown function (DUF933) | 282-350 | 88.0 | 3.5e-25
|
| MMR_HSR1 | 1 | 50S ribosome-binding GTPase | 4-114 | 84.2 | 6.7e-24
|
| FeoB_N | 1 | Ferrous iron transport protein B | 5-48 | 36.3 | 3.7e-09
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874383.1| redox-regulated ATPase YchF [Mycoplasma pneumoniae] | 362/362 (100%) | 1908 | 0.0e+00
|
| ref|WP_014325293.1| redox-regulated ATPase YchF [Mycoplasma pneumoniae] | 348/351 (99%) | 1825 | 0.0e+00
|
| ref|WP_009885916.1| redox-regulated ATPase YchF [Mycoplasma genitalium] | 262/350 (74%) | 1400 | 0.0e+00
|
| ref|WP_014893899.1| redox-regulated ATPase YchF [Mycoplasma genitalium] | 262/350 (74%) | 1399 | 0.0e+00
|
| ref|WP_027123749.1| redox-regulated ATPase YchF [Mycoplasma pirum] | 196/350 (56%) | 990 | 6.9e-130
|
| ref|WP_004025983.1| redox-regulated ATPase YchF [Ureaplasma urealyticum] | 186/350 (53%) | 987 | 1.7e-129
|
| ref|WP_038102473.1| redox-regulated ATPase YchF [Ureaplasma diversum] | 190/349 (54%) | 987 | 1.7e-129
|
| ref|WP_016829079.1| redox-regulated ATPase YchF [Ureaplasma urealyticum] | 186/350 (53%) | 986 | 2.5e-129
|
| ref|WP_027119780.1| redox-regulated ATPase YchF [Mycoplasma testudinis] | 190/350 (54%) | 971 | 4.4e-127
|
| ref|WP_021752543.1| redox-regulated ATPase YchF [Gemella bergeri] | 189/349 (54%) | 970 | 5.6e-127
|
Maintained by Jun Ishikawa