General features
| Gene ID | MPN023
|
| Type | CDS
|
| From | 28245
|
| To | 29783
|
| Strand | +
|
| General name | metS
|
| Definition | methionyl-tRNA synthetase
|
| nt length | 1539
|
| aa length | 512
|
| m.w. | 59262.44
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE9380 metS methionyl-tRNA synthetase 1258371:1255108 | 380 | 2.2e-122
|
| mgen | WP_009885919.1 methionine--tRNA ligase [Mycoplasma genitalium] | 773 | 0.0e+00
|
| mpul | WP_010925291.1 methionine--tRNA ligase [Mycoplasma pulmonis] | 321 | 5.5e-106
|
| mmob | WP_041362864.1 methionine--tRNA ligase [Mycoplasma mobile] | 289 | 1.0e-93
|
| mmyc | NP_975023.1 methionyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 368 | 3.4e-124
|
| mgal | WP_011113389.1 methionine--tRNA ligase [Mycoplasma gallisepticum] | 420 | 3.2e-143
|
| uure | WP_004026240.1 methionine--tRNA ligase [Ureaplasma urealyticum] | 400 | 1.3e-136
|
| phyt | WP_011160608.1 methionine--tRNA ligase [Onion yellows phytoplasma] | 286 | 1.9e-92
|
| bsub | NP_387919.1 methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] | 355 | 1.3e-116
|
| cace | WP_010966273.1 MULTISPECIES: methionine--tRNA ligase [Clostridium] | 346 | 2.1e-113
|
| ecoli | NP_416617.1 methionine--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 166 | 2.9e-45
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA-synt_1g | 2 | tRNA synthetases class I (M) | 5-133, 146-364 | 324.1 | 1e-96
|
| tRNA-synt_1 | 2 | tRNA synthetases class I (I, L, M and V) | 7-130, 287-333 | 96.2 | 1.4e-27
|
| tRNA-synt_1e | 1 | tRNA synthetases class I (C) catalytic domain | 15-138 | 53.8 | 1.8e-14
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874380.1| methionine--tRNA ligase [Mycoplasma pneumoniae] | 512/512 (100%) | 2766 | 0.0e+00
|
| ref|WP_014325290.1| methionine--tRNA ligase [Mycoplasma pneumoniae] | 509/512 (99%) | 2743 | 0.0e+00
|
| ref|WP_014894101.1| methionine--tRNA ligase [Mycoplasma genitalium] | 362/512 (70%) | 2003 | 0.0e+00
|
| ref|WP_014894534.1| methionine--tRNA ligase [Mycoplasma genitalium] | 361/512 (70%) | 1998 | 0.0e+00
|
| ref|WP_009885919.1| methionine--tRNA ligase [Mycoplasma genitalium] | 362/512 (70%) | 1997 | 0.0e+00
|
| ref|WP_014893898.1| methionine--tRNA ligase [Mycoplasma genitalium] | 361/512 (70%) | 1993 | 0.0e+00
|
| ref|WP_159203635.1| methionine--tRNA ligase, partial [Mycoplasma pneumoniae] | 297/298 (99%) | 1622 | 0.0e+00
|
| ref|WP_159203642.1| class I tRNA ligase family protein, partial [Mycoplasma pneumoniae] | 258/261 (98%) | 1373 | 0.0e+00
|
| ref|WP_033160108.1| methionine--tRNA ligase [Mycoplasma alvi] | 242/510 (47%) | 1240 | 3.6e-163
|
| ref|WP_027119410.1| methionine--tRNA ligase [Mycoplasma testudinis] | 223/510 (43%) | 1181 | 3.1e-154
|
Maintained by Jun Ishikawa