General features
| Gene ID | MPN004
|
| Type | CDS
|
| From | 4821
|
| To | 7340
|
| Strand | +
|
| General name | gyrA
|
| Definition | DNA gyrase subunit A
|
| nt length | 2520
|
| aa length | 839
|
| m.w. | 93355.69
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE40 gyrA DNA gyrase subunit A 4970:7483 | 948 | 0.0e+00
|
| mgen | WP_009885559.1 DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma genitalium] | 1452 | 0.0e+00
|
| mpul | WP_010924951.1 DNA gyrase subunit A [Mycoplasma pulmonis] | 803 | 0.0e+00
|
| mmob | WP_011265014.1 DNA gyrase subunit A [Mycoplasma mobile] | 803 | 0.0e+00
|
| mmyc | NP_975018.1 DNA gyrase subunit A [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 654 | 0.0e+00
|
| mgal | WP_011113986.1 DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma gallisepticum] | 1009 | 0.0e+00
|
| uure | WP_004027138.1 DNA topoisomerase (ATP-hydrolyzing) subunit A [Ureaplasma urealyticum] | 947 | 0.0e+00
|
| phyt | WP_101674500.1 DNA gyrase subunit A [Onion yellows phytoplasma] | 722 | 0.0e+00
|
| bsub | NP_387888.1 DNA gyrase (subunit A) [Bacillus subtilis subsp. subtilis str. 168] | 793 | 0.0e+00
|
| cace | WP_010963336.1 MULTISPECIES: DNA gyrase subunit A [Clostridium] | 764 | 0.0e+00
|
| ecoli | NP_416734.1 DNA gyrase subunit A [Escherichia coli str. K-12 substr. MG1655] | 697 | 0.0e+00
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| DNA_topoisoIV | 1 | DNA gyrase/topoisomerase IV, subunit A | 44-482 | 508.6 | 1.3e-152
|
| DNA_gyraseA_C | 6 | DNA gyrase C-terminal domain, beta-propeller | 517-562, 566-615, 621-664, 668-711, 720-755, 769-814 | 197.8 | 1e-59
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874361.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma pneumoniae] | 839/839 (100%) | 4429 | 0.0e+00
|
| ref|WP_015344862.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma pneumoniae] | 838/839 (99%) | 4420 | 0.0e+00
|
| ref|WP_159203429.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma pneumoniae] | 837/839 (99%) | 4417 | 0.0e+00
|
| ref|WP_014574838.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma pneumoniae] | 836/839 (99%) | 4405 | 0.0e+00
|
| ref|WP_014325279.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma pneumoniae] | 835/839 (99%) | 4397 | 0.0e+00
|
| ref|WP_009885559.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma genitalium] | 719/839 (85%) | 3760 | 0.0e+00
|
| ref|WP_014894525.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma genitalium] | 718/839 (85%) | 3756 | 0.0e+00
|
| ref|WP_014894351.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma genitalium] | 718/839 (85%) | 3755 | 0.0e+00
|
| ref|WP_014893889.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma genitalium] | 718/839 (85%) | 3754 | 0.0e+00
|
| ref|WP_027123736.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma pirum] | 504/813 (61%) | 2732 | 0.0e+00
|
Maintained by Jun Ishikawa