General features

Gene IDMYPE6480
TypeCDS
From830334
To828439
Strand-
General nameparE
DefinitionDNA topoisomerase IV subunit B
nt length1896
aa length631
m.w.71422.85
COG[L] Replication, recombination and repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN122 parB topoisomerase IV subunit B 156467:1583746970.0e+00
mgenWP_010869371.1 DNA topoisomerase IV subunit B [Mycoplasma genitalium]6940.0e+00
mpulWP_010925176.1 DNA topoisomerase IV subunit B [Mycoplasma pulmonis]7310.0e+00
mmobWP_011264906.1 DNA topoisomerase IV subunit B [Mycoplasma mobile]7200.0e+00
mmycNP_975496.1 DNA topoisomerase IV subunit B [Mycoplasma mycoides subsp. mycoides SC str. PG1]7160.0e+00
mgalWP_011113666.1 DNA topoisomerase IV subunit B [Mycoplasma gallisepticum]7770.0e+00
uureWP_004026577.1 DNA topoisomerase IV subunit B [Ureaplasma urealyticum]7890.0e+00
bsubNP_389691.2 subunit B of DNA topoisomerase IV (ATP-dependent) [Bacillus subtilis subsp. subtilis str. 168]7290.0e+00

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

DNA_gyraseB1DNA gyrase B219-389191.58.2e-57

DNA_gyraseB_C1DNA gyrase B subunit, carboxyl terminus562-62199.96.5e-29

HATPase_c1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase29-17276.42.3e-21

Toprim1Toprim domain419-52957.31.5e-15

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077468.1| DNA topoisomerase IV subunit B [Mycoplasma penetrans]631/631 (100%)33460.0e+00
ref|WP_036451490.1| DNA topoisomerase IV subunit B [Mycoplasma iowae]510/628 (81%)27740.0e+00
ref|WP_036448661.1| DNA topoisomerase IV subunit B [Mycoplasma pirum]399/627 (63%)21470.0e+00
ref|WP_006689291.1| DNA topoisomerase IV subunit B [Ureaplasma parvum]382/628 (60%)20780.0e+00
ref|WP_016829253.1| DNA topoisomerase IV subunit B [Ureaplasma urealyticum]381/628 (60%)20770.0e+00
ref|WP_004025582.1| DNA topoisomerase IV subunit B [Ureaplasma urealyticum]380/628 (60%)20730.0e+00
ref|WP_142175018.1| DNA topoisomerase IV subunit B [Ureaplasma parvum]381/628 (60%)20720.0e+00
ref|WP_010891785.1| DNA topoisomerase IV subunit B [Ureaplasma parvum]380/628 (60%)20700.0e+00
ref|WP_006688698.1| DNA topoisomerase IV subunit B [Ureaplasma parvum]380/628 (60%)20690.0e+00
ref|WP_088437580.1| DNA topoisomerase IV subunit B [Ureaplasma parvum]380/628 (60%)20690.0e+00

Maintained by Jun Ishikawa