General features

Gene IDMYPE5630
TypeCDS
From718527
To717469
Strand-
General name
Definition23S rRNA (adenine(2503)-C(2))-methyltransferase
nt length1059
aa length352
m.w.40783.55
COG[R] General function prediction only

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mgalWP_011113751.1 hypothetical protein [Mycoplasma gallisepticum]264.0e-01
uureWP_004026056.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Ureaplasma urealyticum]1598.4e-48
bsubNP_389457.1 23S rRNA m2A2503 methyltransferase and tRNA A37 C2 methyltransferase [Bacillus subtilis subsp. subtilis str. 168]3332.4e-114
caceWP_010965033.1 MULTISPECIES: 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Clostridium]2917.2e-98
ecoliNP_417012.1 23S rRNA m(2)A2503 methyltransferase/tRNA m(2)A37 methyltransferase [Escherichia coli str. K-12 substr. MG1655]2121.3e-66

*mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Radical_SAM1Radical SAM superfamily108-27765.86e-18

Fer4_1414Fe-4S single cluster domain112-21531.61.5e-07

Fer4_1214Fe-4S single cluster domain111-21225.91e-05

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_044891383.1| 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Mycoplasma penet...350/350 (100%)18250.0e+00
ref|WP_129374586.1| 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Mycoplasma penet...349/350 (99%)18190.0e+00
ref|WP_004024847.1| 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Mycoplasma iowae...215/340 (63%)11665.0e-157
ref|WP_036452422.1| 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Mycoplasma iowae...214/340 (62%)11622.4e-156
ref|WP_016341044.1| 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Spiroplasma syrp...195/340 (57%)10388.5e-138
ref|WP_016339175.1| 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Spiroplasma chry...193/340 (56%)10171.3e-134
ref|WP_004027752.1| 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Spiroplasma mell...187/340 (55%)10032.2e-132
ref|WP_025317704.1| MULTISPECIES: 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Sp...189/341 (55%)10014.4e-132
ref|WP_053390611.1| 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Spiroplasma kunk...188/340 (55%)9998.2e-132
ref|WP_126820643.1| 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Spiroplasma endo...187/340 (55%)9971.5e-131

Maintained by Jun Ishikawa