General features

Gene IDMYPE5440
TypeCDS
From688066
To686657
Strand-
General name
Definitionpredicted HD superfamily hydrolase
nt length1410
aa length469
m.w.54164.25
COG[R] General function prediction only

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN269 ysr1 nucleotide binding protein 319703:3211841374.5e-37
mgenWP_010869346.1 ribonuclease Y [Mycoplasma genitalium]1189.6e-31
mmycNP_975408.1 phosphodiesterase [Mycoplasma mycoides subsp. mycoides SC str. PG1]2461.2e-77
mgalWP_011113720.1 HDIG domain-containing protein [Mycoplasma gallisepticum]1711.4e-48
uureWP_004025809.1 ribonuclease Y [Ureaplasma urealyticum]3532.1e-119
phytWP_041624932.1 ribonuclease Y [Onion yellows phytoplasma]2294.7e-71
bsubNP_389578.1 endoribonuclease Y [Bacillus subtilis subsp. subtilis str. 168]2171.2e-65
caceWP_010965122.1 MULTISPECIES: ribonuclease Y [Clostridium]2394.3e-74

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

HD1HD domain278-36857.71.3e-15

KH_11KH domain153-20925.77.7e-06

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077366.1| ribonuclease Y [Mycoplasma penetrans]469/469 (100%)24520.0e+00
ref|WP_004025326.1| DUF3552 domain-containing protein [Mycoplasma iowae]225/458 (49%)10431.6e-134
ref|WP_051790180.1| DUF3552 domain-containing protein [Mycoplasma iowae]200/369 (54%)10352.7e-133
ref|WP_038103292.1| HDIG domain-containing protein [Ureaplasma diversum]177/359 (49%)9212.5e-116
ref|WP_016829086.1| HDIG domain-containing protein [Ureaplasma urealyticum]187/355 (52%)9063.3e-114
ref|WP_004025809.1| ribonuclease Y [Ureaplasma urealyticum]187/355 (52%)9054.9e-114
ref|WP_006689245.1| ribonuclease Y [Ureaplasma parvum]187/355 (52%)9055.2e-114
ref|WP_006688749.1| ribonuclease Y [Ureaplasma parvum]187/355 (52%)9055.6e-114
ref|WP_088444147.1| ribonuclease Y [Ureaplasma parvum]187/355 (52%)9056.0e-114
ref|WP_006689085.1| ribonuclease Y [Ureaplasma parvum]186/355 (52%)8987.3e-113

Maintained by Jun Ishikawa