General features

Gene IDMYPE480
TypeCDS
From59137
To58901
Strand-
General namerpsT
Definitionribosomal protein S20
nt length237
aa length78
m.w.8740.16
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN541 rpsT ribosomal protein S20 661126:660863442.8e-09
mgenWP_009885821.1 30S ribosomal protein S20 [Mycoplasma genitalium]433.9e-09
mpulWP_010925457.1 30S ribosomal protein S20 [Mycoplasma pulmonis]329.0e-05
mmobWP_011265040.1 30S ribosomal protein S20 [Mycoplasma mobile]305.5e-04
mmycNP_975096.3 30S ribosomal protein S20 [Mycoplasma mycoides subsp. mycoides SC str. PG1]401.5e-07
mgalWP_011113356.1 30S ribosomal protein S20 [Mycoplasma gallisepticum]332.9e-05
uureWP_004025931.1 30S ribosomal protein S20 [Ureaplasma urealyticum]551.1e-13
phytWP_011160456.1 MULTISPECIES: 30S ribosomal protein S20 [Candidatus Phytoplasma asteris]391.9e-07
bsubNP_390433.2 ribosomal protein S20 (BS20) [Bacillus subtilis subsp. subtilis str. 168]509.4e-11
caceWP_010964586.1 MULTISPECIES: 30S ribosomal protein S20 [Clostridium]425.2e-08
ecoliNP_414564.1 30S ribosomal subunit protein S20 [Escherichia coli str. K-12 substr. MG1655]302.9e-03

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Ribosomal_S20p1Ribosomal protein S202-7553.23.4e-14

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011076874.1| 30S ribosomal protein S20 [Mycoplasma penetrans]78/78 (100%)3761.7e-45
ref|WP_004025193.1| 30S ribosomal protein S20 [Mycoplasma iowae]47/77 (61%)2161.3e-20
ref|WP_052606336.1| 30S ribosomal protein S20 [Acidithrix ferrooxidans]38/78 (48%)1411.3e-09
ref|WP_138190925.1| 30S ribosomal protein S20 [Firmicutes bacterium CS-1]35/76 (46%)1366.6e-09
ref|WP_063388018.1| MULTISPECIES: 30S ribosomal protein S20 [Aeribacillus]39/73 (53%)1368.3e-09
ref|WP_021065661.1| MULTISPECIES: 30S ribosomal protein S20 [Exiguobacterium]37/77 (48%)1359.5e-09
ref|WP_114119906.1| 30S ribosomal protein S20 [Ureaplasma urealyticum]34/73 (46%)1341.5e-08
ref|WP_006688746.1| 30S ribosomal protein S20 [Ureaplasma parvum]33/73 (45%)1332.3e-08
ref|WP_016829043.1| 30S ribosomal protein S20 [Ureaplasma urealyticum]33/73 (45%)1322.4e-08
ref|WP_004025931.1| 30S ribosomal protein S20 [Ureaplasma urealyticum]33/73 (45%)1322.7e-08


Maintained by Jun Ishikawa