General features

Gene IDMYPE3670
TypeCDS
From478578
To479063
Strand+
General namegreA
Definitiontranscription elongation factor
nt length486
aa length161
m.w.18123.47
COG[K] Transcription


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN401 greA transcription elongation factor 483247:4827651679.4e-56
mgenWP_009885993.1 transcription elongation factor GreA [Mycoplasma genitalium]1671.5e-55
mpulWP_041364168.1 transcription elongation factor GreA [Mycoplasma pulmonis]1271.5e-39
mmobWP_011264955.1 transcription elongation factor GreA [Mycoplasma mobile]1111.7e-33
mmycNP_975295.1 transcription elongation factor GreA [Mycoplasma mycoides subsp. mycoides SC str. PG1]1455.2e-47
mgalWP_011113424.1 transcription elongation factor GreA [Mycoplasma gallisepticum]1831.1e-61
uureWP_012560190.1 transcription elongation factor GreA [Ureaplasma urealyticum]1176.3e-36
phytWP_034172300.1 MULTISPECIES: transcription elongation factor GreA [Candidatus Phytoplasma]1291.5e-40
bsubNP_390610.1 transcription elongation factor resolving backtracking / stalling [Bacillus subtilis subsp. subtilis str. 168]1294.9e-40
caceWP_010966474.1 MULTISPECIES: transcription elongation factor GreA [Clostridium]1172.1e-35
ecoliNP_417648.4 transcription elongation factor GreA [Escherichia coli str. K-12 substr. MG1655]1072.2e-31

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

GreA_GreB_N1Transcription elongation factor, N-terminal7-7699.86.9e-29

GreA_GreB1Transcription elongation factor, GreA/GreB, C-term87-16086.01.2e-24

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077194.1| transcription elongation factor GreA [Mycoplasma penetrans]161/161 (100%)8304.0e-112
ref|WP_027120205.1| transcription elongation factor GreA [Mycoplasma testudinis]102/161 (63%)5069.9e-63
ref|WP_027123932.1| transcription elongation factor GreA [Mycoplasma pirum]96/159 (60%)4772.4e-58
ref|WP_033160276.1| transcription elongation factor GreA [Mycoplasma alvi]98/159 (61%)4746.8e-58
ref|WP_004025397.1| transcription elongation factor GreA [Mycoplasma iowae]97/156 (62%)4738.5e-58
ref|WP_027122327.1| transcription elongation factor GreA [Mycoplasma imitans]93/152 (61%)4678.1e-57
ref|WP_011113424.1| transcription elongation factor GreA [Mycoplasma gallisepticum]94/154 (61%)4642.5e-56
ref|WP_085063787.1| transcription elongation factor GreA [Mycoplasma gallisepticum]94/153 (61%)4616.9e-56
ref|WP_010874757.1| transcription elongation factor GreA [Mycoplasma pneumoniae] 88/161 (54%)4242.4e-50
ref|WP_014325511.1| transcription elongation factor GreA [Mycoplasma pneumoniae]88/161 (54%)4242.8e-50


Maintained by Jun Ishikawa