General features

Gene IDMYPE2860
TypeCDS
From374053
To375333
Strand+
General namehisS
Definitionhistidyl-tRNA synthetase
nt length1281
aa length426
m.w.49904.64
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN045 hisS histidyl-tRNA synthetase 53077:543212559.6e-83
mgenWP_009885699.1 histidine--tRNA ligase [Mycoplasma genitalium]2839.2e-94
mpulWP_010925137.1 histidine--tRNA ligase [Mycoplasma pulmonis]2615.0e-85
mmobWP_011264793.1 histidine--tRNA ligase [Mycoplasma mobile]2451.3e-78
mmycNP_975332.1 histidyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1]2882.0e-95
mgalWP_011113416.1 histidine--tRNA ligase [Mycoplasma gallisepticum]3033.5e-101
uureWP_004025545.1 histidine--tRNA ligase [Ureaplasma urealyticum]3571.8e-122
phytWP_011160502.1 MULTISPECIES: histidine--tRNA ligase [Candidatus Phytoplasma asteris]2536.1e-82
bsubNP_390634.1 histidyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]2973.8e-98
caceWP_010966027.1 MULTISPECIES: histidine--tRNA ligase [Clostridium]1101.9e-27
ecoliNP_417009.1 histidine--tRNA ligase [Escherichia coli str. K-12 substr. MG1655]2636.3e-85

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

tRNA-synt_His1Histidyl-tRNA synthetase8-313120.86.9e-35

tRNA-synt_2b1tRNA synthetase class II core domain (G, H, P, S and T)66-32155.18.8e-15

HGTP_anticodon1Anticodon binding domain330-42039.35.3e-10

tRNA-synt_21tRNA synthetases class II (D, K and N)104-26222.07.2e-05

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077114.1| histidine--tRNA ligase [Mycoplasma penetrans]426/426 (100%)22060.0e+00
ref|WP_036452675.1| histidine--tRNA ligase [Mycoplasma iowae]242/419 (57%)12213.7e-163
ref|WP_004024757.1| histidine--tRNA ligase [Mycoplasma iowae]241/419 (57%)12198.1e-163
ref|WP_006688869.1| histidine--tRNA ligase [Ureaplasma parvum]192/410 (46%)9173.5e-117
ref|WP_004025545.1| histidine--tRNA ligase [Ureaplasma urealyticum]206/416 (49%)9174.3e-117
ref|WP_131613404.1| histidine--tRNA ligase [Mycoplasma todarodis]186/419 (44%)8827.7e-112
ref|WP_070444954.1| histidine--tRNA ligase [Granulicatella sp. HMSC31F03]178/413 (43%)8821.2e-111
ref|WP_070437864.1| histidine--tRNA ligase [Granulicatella sp. HMSC30F09]178/413 (43%)8821.3e-111
ref|WP_049554617.1| MULTISPECIES: histidine--tRNA ligase [unclassified Granulicatella]179/413 (43%)8811.6e-111
ref|WP_048781901.1| histidine--tRNA ligase [Streptococcus sp. 263_SSPC]178/413 (43%)8768.6e-111


Maintained by Jun Ishikawa