General features

Gene IDMYPE2460
TypeCDS
From303446
To303979
Strand+
General name
Definitionrecombination protein U
nt length534
aa length177
m.w.20962.37
COG[R] General function prediction only


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN528a Penicillin-binding protein-related factor A, putative recombinase 650402:650920906.7e-25
mgenWP_009885810.1 recombination protein U [Mycoplasma genitalium]1027.7e-30
mpulWP_010924890.1 Holliday junction resolvase RecU [Mycoplasma pulmonis]903.3e-25
mmobWP_041362956.1 Holliday junction resolvase RecU [Mycoplasma mobile]882.7e-24
mmycNP_975402.1 recombination protein U [Mycoplasma mycoides subsp. mycoides SC str. PG1]673.9e-16
mgalWP_011113372.1 Holliday junction resolvase RecU [Mycoplasma gallisepticum]1007.1e-29
bsubNP_390112.1 Holliday junction resolvase [Bacillus subtilis subsp. subtilis str. 168]782.8e-19

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; bsub, Bacillus subtilis;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

RecU1Recombination protein U13-172148.61.5e-43

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_083755092.1| Holliday junction resolvase RecU [Mycoplasma penetrans]176/176 (100%)9046.0e-123
ref|WP_044891217.1| Holliday junction resolvase RecU [Mycoplasma penetrans]171/171 (100%)8761.2e-118
ref|WP_050796836.1| Holliday junction resolvase RecU [Mycoplasma iowae]79/168 (47%)3751.6e-42
ref|WP_004024866.1| Holliday junction resolvase RecU [Mycoplasma iowae]78/164 (47%)3724.3e-42
ref|WP_052664032.1| Holliday junction resolvase RecU [Mycoplasma alvi]62/165 (37%)2865.3e-29
ref|WP_044888864.1| Holliday junction resolvase RecU [Mycoplasma glycophilum]68/159 (42%)2793.6e-28
ref|WP_031489008.1| hypothetical protein [Ureaplasma canigenitalium]64/169 (37%)2779.2e-28
ref|WP_119572314.1| Holliday junction resolvase RecU [Mycoplasma gallopavonis]69/164 (42%)2733.1e-27
ref|WP_095335077.1| hypothetical protein [Mycoplasma agassizii]63/156 (40%)2664.5e-26
ref|WP_004795541.1| Holliday junction resolvase RecU [Mycoplasma canis]67/159 (42%)2655.1e-26


Maintained by Jun Ishikawa