General features

Gene IDMYPE1810
TypeCDS
From228442
To227540
Strand-
General name
Definitionconserved hypothetical protein
nt length903
aa length300
m.w.35415.20
COG[S] Function unknown


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN241 conserved hypothetical protein 293265:2941071047.5e-28
mgenWP_010869332.1 DNA-binding protein WhiA [Mycoplasma genitalium]1132.0e-31
mpulWP_041363985.1 DNA-binding protein WhiA [Mycoplasma pulmonis]942.2e-24
mmobWP_011264964.1 DNA-binding protein WhiA [Mycoplasma mobile]1141.3e-31
mmycNP_975902.1 hypothetical protein MSC_0935 [Mycoplasma mycoides subsp. mycoides SC str. PG1]1323.7e-38
mgalWP_011113709.1 DNA-binding protein WhiA [Mycoplasma gallisepticum]901.2e-22
uureWP_004027130.1 DNA-binding protein WhiA [Ureaplasma urealyticum]1542.5e-46
phytWP_041624757.1 DNA-binding protein WhiA [Onion yellows phytoplasma]1071.0e-28
bsubNP_391355.1 putative morphogen [Bacillus subtilis subsp. subtilis str. 168]1279.6e-36
caceWP_010963835.1 MULTISPECIES: DNA-binding protein WhiA [Clostridium]1251.0e-34
ecoliNP_415039.1 DNA-binding transcriptional repressor AllR [Escherichia coli str. K-12 substr. MG1655]279.2e-01

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

LAGLIDADG_WhiA1WhiA LAGLIDADG-like domain118-20888.32.6e-25

HTH_WhiA1WhiA C-terminal HTH domain213-29877.66.7e-22

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077008.1| DNA-binding protein WhiA [Mycoplasma penetrans]300/300 (100%)15380.0e+00
ref|WP_004024887.1| DNA-binding protein WhiA [Mycoplasma iowae]135/300 (45%)6181.6e-75
ref|WP_066191817.1| DNA-binding protein WhiA, partial [Bacteroidales bacterium Barb6]95/246 (38%)4592.7e-52
ref|WP_004028307.1| DNA-binding protein WhiA [Spiroplasma melliferum]107/297 (36%)4563.6e-51
ref|WP_160624284.1| DNA-binding protein WhiA [Clostridiaceae bacterium DONG20-135]95/299 (31%)4531.0e-50
ref|WP_071891877.1| DNA-binding protein WhiA [Spiroplasma citri]105/297 (35%)4487.3e-50
ref|WP_070406387.1| MULTISPECIES: DNA-binding protein WhiA [unclassified Spiroplasma]102/297 (34%)4477.7e-50
ref|WP_053390415.1| DNA-binding protein WhiA [Spiroplasma kunkelii]105/297 (35%)4442.7e-49
ref|WP_126821315.1| DNA-binding protein WhiA [Spiroplasma endosymbiont of Megaselia nigra]105/297 (35%)4433.1e-49
ref|WP_105298641.1| DNA-binding protein WhiA [Spiroplasma sp. ChiS]104/297 (35%)4424.6e-49


Maintained by Jun Ishikawa