General features

Gene IDMYPE130
TypeCDS
From16343
To15438
Strand-
General name
Definitionpseudouridine synthase
nt length906
aa length301
m.w.35769.74
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mgenWP_014894681.1 RluA family pseudouridine synthase [Mycoplasma genitalium]1127.9e-31
mmycNP_975742.1 RNA pseudouridylate synthase [Mycoplasma mycoides subsp. mycoides SC str. PG1]1252.6e-35
mgalWP_011113746.1 RluA family pseudouridine synthase [Mycoplasma gallisepticum]1664.6e-51
uureWP_004025865.1 RluA family pseudouridine synthase [Ureaplasma urealyticum]1931.9e-61

*mgen, Mycoplasma genitalium; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

PseudoU_synth_21RNA pseudouridylate synthase91-246116.21.4e-33

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011076839.1| RluA family pseudouridine synthase [Mycoplasma penetrans]301/301 (100%)15440.0e+00
ref|WP_051790256.1| RluA family pseudouridine synthase [Mycoplasma iowae]143/301 (47%)7251.0e-91
ref|WP_004024795.1| RluA family pseudouridine synthase [Mycoplasma iowae]144/301 (47%)7231.9e-91
ref|WP_094548843.1| RluA family pseudouridine synthase [Petroclostridium xylanilyticum]118/300 (39%)5434.2e-64
ref|WP_038324216.1| MULTISPECIES: RluA family pseudouridine synthase [Bacteria]124/300 (41%)5382.5e-63
ref|WP_135659180.1| RluA family pseudouridine synthase [Caproiciproducens galactitolivoran...124/300 (41%)5322.1e-62
ref|WP_118144437.1| RluA family pseudouridine synthase [Ruminococcus sp. TF12-19AC]127/300 (42%)5322.3e-62
ref|WP_141825257.1| RluA family pseudouridine synthase [Clostridium sp. KNHs216]123/300 (41%)5312.9e-62
ref|WP_034835861.1| RluA family pseudouridine synthase [[Clostridium] cellulosi]118/300 (39%)5281.0e-61
ref|WP_117886057.1| RluA family pseudouridine synthase [Ruminococcus sp. AM28-29LB]127/300 (42%)5252.9e-61


Maintained by Jun Ishikawa