General features
| Gene ID | MYPE10330
|
| Type | CDS
|
| From | 1350868
|
| To | 1349771
|
| Strand | -
|
| General name |
|
| Definition | YchF GTPase
|
| nt length | 1098
|
| aa length | 365
|
| m.w. | 41089.11
|
| COG | [R] General function prediction only
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN026 yyaF GTPase-like protein 31111:32199 | 368 | 1.4e-128
|
| mgen | WP_009885916.1 redox-regulated ATPase YchF [Mycoplasma genitalium] | 402 | 5.9e-142
|
| mpul | WP_041363939.1 redox-regulated ATPase YchF [Mycoplasma pulmonis] | 397 | 6.5e-140
|
| mmob | WP_011265122.1 redox-regulated ATPase YchF [Mycoplasma mobile] | 370 | 3.6e-129
|
| mmyc | NP_975883.1 GTP-dependent nucleic acid-binding protein EngD [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 393 | 5.0e-138
|
| mgal | WP_011113923.1 redox-regulated ATPase YchF [Mycoplasma gallisepticum] | 377 | 5.9e-132
|
| uure | WP_004025983.1 redox-regulated ATPase YchF [Ureaplasma urealyticum] | 427 | 8.0e-152
|
| phyt | WP_011160558.1 MULTISPECIES: redox-regulated ATPase YchF [Candidatus Phytoplasma asteris] | 379 | 7.4e-133
|
| bsub | NP_391972.1 potassium-dependent informational ATPase interacting with 70S ribosome; ROS stress regulator [Bacillus subtilis subsp. subtilis str. 168] | 415 | 3.3e-146
|
| cace | WP_010965433.1 MULTISPECIES: redox-regulated ATPase YchF [Clostridium] | 348 | 7.0e-120
|
| ecoli | NP_415721.1 redox-responsive ATPase YchF [Escherichia coli str. K-12 substr. MG1655] | 369 | 6.5e-128
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| YchF-GTPase_C | 1 | Protein of unknown function (DUF933) | 281-364 | 134.4 | 1.2e-39
|
| MMR_HSR1 | 1 | 50S ribosome-binding GTPase | 6-119 | 86.5 | 1.2e-24
|
| FeoB_N | 1 | Ferrous iron transport protein B | 6-47 | 34.2 | 1.7e-08
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077846.1| redox-regulated ATPase YchF [Mycoplasma penetrans] | 365/365 (100%) | 1898 | 0.0e+00
|
| ref|WP_004024625.1| redox-regulated ATPase YchF [Mycoplasma iowae] | 252/365 (69%) | 1363 | 0.0e+00
|
| ref|WP_027123749.1| redox-regulated ATPase YchF [Mycoplasma pirum] | 231/363 (63%) | 1154 | 7.9e-155
|
| ref|WP_087301573.1| MULTISPECIES: redox-regulated ATPase YchF [unclassified Erysipelatoclo... | 219/365 (60%) | 1153 | 1.3e-154
|
| ref|WP_072685371.1| redox-regulated ATPase YchF [Holdemania sp. Marseille-P2844] | 218/365 (59%) | 1150 | 3.2e-154
|
| ref|WP_124763266.1| redox-regulated ATPase YchF [Erysipelotrichaceae bacterium OH741_COT-3... | 212/365 (58%) | 1150 | 3.7e-154
|
| ref|WP_027119780.1| redox-regulated ATPase YchF [Mycoplasma testudinis] | 219/363 (60%) | 1149 | 4.9e-154
|
| ref|WP_027089218.1| redox-regulated ATPase YchF [[Clostridium] saccharogumia] | 217/365 (59%) | 1149 | 5.5e-154
|
| ref|WP_092355292.1| redox-regulated ATPase YchF [[Clostridium] cocleatum] | 217/365 (59%) | 1146 | 1.3e-153
|
| ref|WP_003539483.1| MULTISPECIES: redox-regulated ATPase YchF [Erysipelotrichaceae] | 219/365 (60%) | 1143 | 3.6e-153
|
Maintained by Jun Ishikawa