General features

Gene IDMYPE10330
TypeCDS
From1350868
To1349771
Strand-
General name
DefinitionYchF GTPase
nt length1098
aa length365
m.w.41089.11
COG[R] General function prediction only


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN026 yyaF GTPase-like protein 31111:321993681.4e-128
mgenWP_009885916.1 redox-regulated ATPase YchF [Mycoplasma genitalium]4025.9e-142
mpulWP_041363939.1 redox-regulated ATPase YchF [Mycoplasma pulmonis]3976.5e-140
mmobWP_011265122.1 redox-regulated ATPase YchF [Mycoplasma mobile]3703.6e-129
mmycNP_975883.1 GTP-dependent nucleic acid-binding protein EngD [Mycoplasma mycoides subsp. mycoides SC str. PG1]3935.0e-138
mgalWP_011113923.1 redox-regulated ATPase YchF [Mycoplasma gallisepticum]3775.9e-132
uureWP_004025983.1 redox-regulated ATPase YchF [Ureaplasma urealyticum]4278.0e-152
phytWP_011160558.1 MULTISPECIES: redox-regulated ATPase YchF [Candidatus Phytoplasma asteris]3797.4e-133
bsubNP_391972.1 potassium-dependent informational ATPase interacting with 70S ribosome; ROS stress regulator [Bacillus subtilis subsp. subtilis str. 168]4153.3e-146
caceWP_010965433.1 MULTISPECIES: redox-regulated ATPase YchF [Clostridium]3487.0e-120
ecoliNP_415721.1 redox-responsive ATPase YchF [Escherichia coli str. K-12 substr. MG1655]3696.5e-128

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

YchF-GTPase_C1Protein of unknown function (DUF933)281-364134.41.2e-39

MMR_HSR1150S ribosome-binding GTPase6-11986.51.2e-24

FeoB_N1Ferrous iron transport protein B6-4734.21.7e-08

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077846.1| redox-regulated ATPase YchF [Mycoplasma penetrans]365/365 (100%)18980.0e+00
ref|WP_004024625.1| redox-regulated ATPase YchF [Mycoplasma iowae]252/365 (69%)13630.0e+00
ref|WP_027123749.1| redox-regulated ATPase YchF [Mycoplasma pirum]231/363 (63%)11547.9e-155
ref|WP_087301573.1| MULTISPECIES: redox-regulated ATPase YchF [unclassified Erysipelatoclo...219/365 (60%)11531.3e-154
ref|WP_072685371.1| redox-regulated ATPase YchF [Holdemania sp. Marseille-P2844]218/365 (59%)11503.2e-154
ref|WP_124763266.1| redox-regulated ATPase YchF [Erysipelotrichaceae bacterium OH741_COT-3...212/365 (58%)11503.7e-154
ref|WP_027119780.1| redox-regulated ATPase YchF [Mycoplasma testudinis]219/363 (60%)11494.9e-154
ref|WP_027089218.1| redox-regulated ATPase YchF [[Clostridium] saccharogumia]217/365 (59%)11495.5e-154
ref|WP_092355292.1| redox-regulated ATPase YchF [[Clostridium] cocleatum]217/365 (59%)11461.3e-153
ref|WP_003539483.1| MULTISPECIES: redox-regulated ATPase YchF [Erysipelotrichaceae]219/365 (60%)11433.6e-153


Maintained by Jun Ishikawa