General features
| Gene ID | MYPE10060
|
| Type | CDS
|
| From | 1323770
|
| To | 1323447
|
| Strand | -
|
| General name | rplX
|
| Definition | ribosomal protein L24
|
| nt length | 324
|
| aa length | 107
|
| m.w. | 11886.79
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN176 rplX ribosomal protein L24 224000:224335 | 84 | 1.9e-24
|
| mgen | WP_009885846.1 50S ribosomal protein L24 [Mycoplasma genitalium] | 73 | 4.6e-20
|
| mpul | WP_010925377.1 50S ribosomal protein L24 [Mycoplasma pulmonis] | 66 | 2.7e-17
|
| mmob | WP_011264766.1 50S ribosomal protein L24 [Mycoplasma mobile] | 45 | 3.9e-09
|
| mmyc | NP_975710.1 50S ribosomal protein L24 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 67 | 1.6e-17
|
| mgal | WP_011113291.1 50S ribosomal protein L24 [Mycoplasma gallisepticum] | 105 | 1.6e-32
|
| uure | WP_004025812.1 50S ribosomal protein L24 [Ureaplasma urealyticum] | 97 | 2.7e-29
|
| bsub | NP_388008.1 ribosomal protein L24 (BL23) [Bacillus subtilis subsp. subtilis str. 168] | 80 | 2.9e-22
|
| cace | WP_010966401.1 MULTISPECIES: 50S ribosomal protein L24 [Clostridium] | 63 | 1.5e-15
|
| ecoli | NP_417768.1 50S ribosomal subunit protein L24 [Escherichia coli str. K-12 substr. MG1655] | 51 | 6.0e-11
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| ribosomal_L24 | 1 | Ribosomal proteins 50S L24/mitochondrial 39S L24 | 39-104 | 69.7 | 2.1e-19
|
| KOW | 1 | KOW motif | 6-37 | 31.3 | 1.4e-07
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077820.1| 50S ribosomal protein L24 [Mycoplasma penetrans] | 107/107 (100%) | 535 | 6.2e-69
|
| ref|WP_004024693.1| 50S ribosomal protein L24 [Mycoplasma iowae] | 68/107 (63%) | 360 | 3.0e-42
|
| ref|WP_011113291.1| 50S ribosomal protein L24 [Mycoplasma gallisepticum] | 56/105 (53%) | 262 | 3.4e-27
|
| ref|WP_027122186.1| 50S ribosomal protein L24 [Mycoplasma imitans] | 55/105 (52%) | 255 | 3.5e-26
|
| ref|WP_004025812.1| 50S ribosomal protein L24 [Ureaplasma urealyticum] | 53/106 (50%) | 240 | 6.3e-24
|
| ref|WP_006688875.1| 50S ribosomal protein L24 [Ureaplasma parvum] | 53/104 (50%) | 240 | 7.3e-24
|
| ref|WP_040225836.1| 50S ribosomal protein L24 [Bhargavaea cecembensis] | 50/102 (49%) | 236 | 2.4e-23
|
| ref|WP_006703282.1| 50S ribosomal protein L24 [Granulicatella elegans] | 49/96 (51%) | 235 | 3.4e-23
|
| ref|WP_085056284.1| 50S ribosomal protein L24 [Mycoplasma sp. (ex Biomphalaria glabrata)] | 49/104 (47%) | 233 | 6.7e-23
|
| ref|WP_084017277.1| 50S ribosomal protein L24 [Moheibacter sediminis] | 52/102 (50%) | 232 | 8.5e-23
|
Maintained by Jun Ishikawa