General features
| Gene ID | MYPE10010
|
| Type | CDS
|
| From | 1321698
|
| To | 1321339
|
| Strand | -
|
| General name | rplR
|
| Definition | ribosomal protein L18
|
| nt length | 360
|
| aa length | 119
|
| m.w. | 13469.58
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN181 rplR ribosomal protein L18 226051:226401 | 93 | 9.0e-28
|
| mgen | WP_009885853.1 50S ribosomal protein L18 [Mycoplasma genitalium] | 102 | 2.8e-31
|
| mpul | WP_010925372.1 50S ribosomal protein L18 [Mycoplasma pulmonis] | 63 | 1.0e-15
|
| mmob | WP_011264771.1 50S ribosomal protein L18 [Mycoplasma mobile] | 81 | 6.7e-23
|
| mmyc | NP_975705.1 50S ribosomal protein L18 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 82 | 2.5e-23
|
| mgal | WP_011113296.1 50S ribosomal protein L18 [Mycoplasma gallisepticum] | 118 | 2.5e-37
|
| uure | WP_004025963.1 50S ribosomal protein L18 [Ureaplasma urealyticum] | 120 | 3.0e-38
|
| phyt | WP_011160591.1 MULTISPECIES: 50S ribosomal protein L18 [Candidatus Phytoplasma asteris] | 82 | 2.4e-23
|
| bsub | NP_388013.2 ribosomal protein L18 [Bacillus subtilis subsp. subtilis str. 168] | 91 | 3.6e-26
|
| cace | WP_010966396.1 MULTISPECIES: 50S ribosomal protein L18 [Clostridium] | 80 | 1.2e-21
|
| ecoli | NP_417763.1 50S ribosomal subunit protein L18 [Escherichia coli str. K-12 substr. MG1655] | 70 | 1.2e-17
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L18p | 1 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | 7-119 | 121.6 | 2.1e-35
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077815.1| 50S ribosomal protein L18 [Mycoplasma penetrans] | 119/119 (100%) | 603 | 8.1e-79
|
| ref|WP_004024688.1| 50S ribosomal protein L18 [Mycoplasma iowae] | 96/119 (80%) | 431 | 1.1e-52
|
| ref|WP_027122190.1| 50S ribosomal protein L18 [Mycoplasma imitans] | 71/119 (59%) | 367 | 5.9e-43
|
| ref|WP_027124205.1| 50S ribosomal protein L18 [Mycoplasma pirum] | 65/119 (54%) | 330 | 3.4e-37
|
| ref|WP_027120102.1| 50S ribosomal protein L18 [Mycoplasma testudinis] | 69/119 (57%) | 308 | 7.7e-34
|
| ref|WP_141926359.1| 50S ribosomal protein L18 [Ureaplasma urealyticum] | 65/119 (54%) | 302 | 5.8e-33
|
| ref|WP_004025963.1| 50S ribosomal protein L18 [Ureaplasma urealyticum] | 65/119 (54%) | 301 | 7.2e-33
|
| ref|WP_006688827.1| 50S ribosomal protein L18 [Ureaplasma parvum] | 65/119 (54%) | 300 | 1.2e-32
|
| ref|WP_038101526.1| 50S ribosomal protein L18 [Ureaplasma diversum] | 66/119 (55%) | 297 | 2.9e-32
|
| ref|WP_011113296.1| 50S ribosomal protein L18 [Mycoplasma gallisepticum] | 72/119 (60%) | 295 | 5.4e-32
|
Maintained by Jun Ishikawa