General features

Gene IDMYPE100
TypeCDS
From13682
To14167
Strand+
General namecspR
DefinitionrRNA methylase
nt length486
aa length161
m.w.18975.60
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN521 ygl3 putative rRNA methylase 642760:6432601443.7e-46
mgenWP_009885804.1 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL [Mycoplasma genitalium]1442.4e-46
mpulWP_010925107.1 tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma pulmonis]1083.1e-32
mmobWP_011264641.1 tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma mobile]1033.1e-30
mmycNP_975595.1 rRNA methylase [Mycoplasma mycoides subsp. mycoides SC str. PG1]1142.1e-34
mgalWP_011113559.1 tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma gallisepticum]1643.8e-54
uureWP_004025546.1 tRNA (cytidine(34)-2'-O)-methyltransferase [Ureaplasma urealyticum]1308.4e-41
bsubNP_388774.2 tRNA (cytidine(34)-2'-O)-methyltransferase [Bacillus subtilis subsp. subtilis str. 168]1397.6e-44
caceWP_010964019.1 MULTISPECIES: tRNA (cytidine(34)-2'-O)-methyltransferase [Clostridium]1223.9e-37
ecoliNP_418063.1 tRNA (cytidine/uridine-2'-O)-ribose methyltransferase [Escherichia coli str. K-12 substr. MG1655]1052.0e-30

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

SpoU_methylase1SpoU rRNA Methylase family2-148110.85.7e-32

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011076836.1| tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma penetrans]161/161 (100%)8487.8e-115
ref|WP_004024796.1| tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma iowae]88/151 (58%)4763.0e-58
ref|WP_014885985.1| tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma gallisepticum]81/160 (50%)4234.6e-50
ref|WP_151029762.1| tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma gallisepticum]81/160 (50%)4218.1e-50
ref|WP_014574663.1| tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma gallisepticum]80/160 (50%)4191.6e-49
ref|WP_014886556.1| tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma gallisepticum]80/160 (50%)4191.9e-49
ref|WP_011884215.1| tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma gallisepticum]80/160 (50%)4182.4e-49
ref|WP_065164984.1| tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma gallisepticum]80/160 (50%)4174.0e-49
ref|WP_011113559.1| tRNA (cytidine(34)-2'-O)-methyltransferase [Mycoplasma gallisepticum]79/160 (49%)4148.3e-49
ref|WP_102169796.1| tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2... [Streptococcus s...84/161 (52%)4094.8e-48


Maintained by Jun Ishikawa