General features

Gene IDMPN481
TypeCDS
From586484
To585903
Strand-
General nameyihA
DefinitionGTP-binding, era-like
nt length582
aa length193
m.w.21818.19
COG[R] General function prediction only

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE410 predicted GTP-binding protein 48615:491751292.2e-39
mgenWP_010869438.1 YihA family ribosome biogenesis GTP-binding protein [Mycoplasma genitalium]3003.8e-107
mpulWP_010925043.1 YihA family ribosome biogenesis GTP-binding protein [Mycoplasma pulmonis]1154.2e-34
mmobWP_011264860.1 YihA family ribosome biogenesis GTP-binding protein [Mycoplasma mobile]1224.0e-37
mmycNP_975289.1 ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides subsp. mycoides SC str. PG1]1054.4e-30
mgalWP_011113826.1 YihA family ribosome biogenesis GTP-binding protein [Mycoplasma gallisepticum]1764.9e-58
uureWP_004025617.1 YihA family ribosome biogenesis GTP-binding protein [Ureaplasma urealyticum]1522.9e-48
phytWP_011160392.1 MULTISPECIES: YihA family ribosome biogenesis GTP-binding protein [Candidatus Phytoplasma asteris]938.3e-26
bsubNP_390697.1 GTPase involved in ribosome 50S subunit assembly (maturation of the central 50S protuberance) [Bacillus subtilis subsp. subtilis str. 168]1071.9e-30
caceWP_010965924.1 MULTISPECIES: YihA family ribosome biogenesis GTP-binding protein [Clostridium]1117.1e-32
ecoliNP_418301.3 GTP-binding protein YihA [Escherichia coli str. K-12 substr. MG1655]1147.5e-33

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

MMR_HSR1150S ribosome-binding GTPase22-13765.93.2e-18

FeoB_N1Ferrous iron transport protein B22-18237.41.7e-09

SRPRB1Signal recognition particle receptor beta subunit20-12021.50.00013

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874837.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma pneumo...193/193 (100%)10092.2e-138
ref|WP_159201745.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma pneumo...192/193 (99%)10031.9e-137
ref|WP_014894297.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma genita...144/189 (76%)7723.2e-102
ref|WP_010869438.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma genita...143/189 (75%)7681.3e-101
ref|WP_027119647.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma testud...96/180 (53%)5162.4e-63
ref|WP_011113826.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma gallis...82/183 (44%)4461.1e-52
ref|WP_065165330.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma gallis...82/183 (44%)4441.9e-52
ref|WP_027121815.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma imitan...81/183 (44%)4424.2e-52
ref|WP_011884843.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma gallis...81/183 (44%)4408.0e-52
ref|WP_027123853.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma pirum]87/187 (46%)4277.2e-50

Maintained by Jun Ishikawa