General features

Gene IDMPN379
TypeCDS
From456272
To457147
Strand+
General namepolA
Definition5'-3' exonuclease
nt length876
aa length291
m.w.32971.69
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE1990 polI DNA polymerase I: 5'-3' exonuclease 252208:2530862194.1e-72
mgenWP_010869399.1 5'-3' exonuclease [Mycoplasma genitalium]4223.9e-152
mpulWP_010925521.1 5'-3' exonuclease [Mycoplasma pulmonis]1074.8e-29
mmobWP_011265008.1 5'-3' exonuclease [Mycoplasma mobile]1526.2e-46
mmycNP_975660.1 DNA polymerase I [Mycoplasma mycoides subsp. mycoides SC str. PG1]1642.4e-47
mgalWP_011113475.1 5'-3' exonuclease [Mycoplasma gallisepticum]2086.9e-68
uureWP_004025688.1 5'-3' exonuclease [Ureaplasma urealyticum]2272.7e-75
phytWP_011161020.1 5'-3' exonuclease [Onion yellows phytoplasma]1821.5e-57
bsubNP_390787.1 DNA polymerase I [Bacillus subtilis subsp. subtilis str. 168]1662.3e-47
caceWP_010964413.1 MULTISPECIES: DNA polymerase I [Clostridium]1825.3e-53
ecoliNP_418300.1 DNA polymerase I [Escherichia coli str. K-12 substr. MG1655]1253.5e-33

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

5_3_exonuc_N15'-3' exonuclease, N-terminal resolvase-like domain4-172142.31.2e-41

5_3_exonuc15'-3' exonuclease, C-terminal SAM fold176-26982.72.1e-23

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874735.1| 5'-3' exonuclease [Mycoplasma pneumoniae] 291/291 (100%)15410.0e+00
ref|WP_014894010.1| 5'-3' exonuclease [Mycoplasma genitalium]199/291 (68%)10868.3e-147
ref|WP_010869399.1| 5'-3' exonuclease [Mycoplasma genitalium]198/291 (68%)10841.3e-146
ref|WP_036448755.1| 5'-3' exonuclease [Mycoplasma pirum]135/283 (47%)6821.7e-85
ref|WP_027123861.1| hypothetical protein [Mycoplasma pirum]135/283 (47%)6821.9e-85
ref|WP_033159715.1| 5'-3' exonuclease [Mycoplasma alvi]127/283 (44%)6241.3e-76
ref|WP_006688635.1| 5'-3' exonuclease [Ureaplasma parvum]121/276 (43%)5901.1e-71
ref|WP_004024656.1| 5'-3' exonuclease [Mycoplasma iowae]117/286 (40%)5812.8e-70
ref|WP_036452313.1| 5'-3' exonuclease [Mycoplasma iowae]117/286 (40%)5803.6e-70
ref|WP_004027431.1| 5'-3' exonuclease [Ureaplasma urealyticum]118/281 (41%)5804.1e-70


Maintained by Jun Ishikawa