General features
| Gene ID | MPN339
|
| Type | CDS
|
| From | 403243
|
| To | 403917
|
| Strand | +
|
| General name |
|
| Definition | conserved hypothetical protein
|
| nt length | 675
|
| aa length | 224
|
| m.w. | 25613.19
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE8920 RDD family domain-containing protein 1200919:1200122 | 38 | 3.9e-05
|
| mgen | WP_014894004.1 RDD family protein [Mycoplasma genitalium] | 198 | 4.5e-66
|
| mmob | WP_156768874.1 hypothetical protein [Mycoplasma mobile] | 27 | 1.4e-01
|
| mmyc | NP_975746.1 hypothetical protein MSC_0770 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 30 | 2.6e-02
|
| mgal | WP_011113627.1 RDD family protein [Mycoplasma gallisepticum] | 65 | 1.5e-14
|
| uure | WP_004026013.1 RDD family protein [Ureaplasma urealyticum] | 32 | 3.7e-03
|
| phyt | WP_041624681.1 MULTISPECIES: hemolysin III [Candidatus Phytoplasma asteris] | 26 | 1.9e-01
|
| bsub | NP_390546.1 low-affinity branched-chain amino acid transporter [Bacillus subtilis subsp. subtilis str. 168] | 25 | 2.6e+00
|
| cace | WP_010965551.1 sensor histidine kinase [Clostridium acetobutylicum] | 28 | 2.8e-01
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| RDD | 1 | RDD family | 19-184 | 35.6 | 9.7e-09
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874695.1| RDD family protein [Mycoplasma pneumoniae] | 224/224 (100%) | 1143 | 9.6e-158
|
| ref|WP_014325471.1| RDD family protein [Mycoplasma pneumoniae] | 223/224 (99%) | 1138 | 4.7e-157
|
| ref|WP_161609237.1| RDD family protein [Mycoplasma pneumoniae] | 222/224 (99%) | 1135 | 1.7e-156
|
| ref|WP_019830464.1| RDD family protein [Mycoplasma pneumoniae] | 222/224 (99%) | 1129 | 1.3e-155
|
| ref|WP_054173855.1| RDD family protein [Mycoplasma pneumoniae] | 222/224 (99%) | 1128 | 1.7e-155
|
| ref|WP_014894632.1| RDD family protein [Mycoplasma genitalium] | 103/222 (46%) | 508 | 4.4e-61
|
| ref|WP_014894004.1| RDD family protein [Mycoplasma genitalium] | 103/222 (46%) | 504 | 1.5e-60
|
| ref|WP_027124058.1| RDD family protein [Mycoplasma pirum] | 69/219 (31%) | 212 | 7.6e-17
|
| ref|WP_027120159.1| RDD family protein [Mycoplasma testudinis] | 66/222 (29%) | 198 | 6.9e-15
|
| ref|WP_011884437.1| RDD family protein [Mycoplasma gallisepticum] | 69/222 (31%) | 184 | 7.6e-13
|
Maintained by Jun Ishikawa