General features

Gene IDMPN292
TypeCDS
From349804
To348875
Strand-
General nameyceC
Definitionribosomal large subunit pseudouridine synthase D-like protein
nt length930
aa length309
m.w.35228.33
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE1310 pseudouridine synthase 157719:1568231694.7e-52
mgenWP_009885746.1 RluA family pseudouridine synthase [Mycoplasma genitalium]3532.1e-124
mpulWP_010925102.1 RluA family pseudouridine synthase [Mycoplasma pulmonis]1873.2e-59
mmobWP_011264846.1 RluA family pseudouridine synthase [Mycoplasma mobile]1561.6e-47
mmycNP_975564.1 ribosomal large subunit pseudouridylate synthase D [Mycoplasma mycoides subsp. mycoides SC str. PG1]1861.2e-58
mgalWP_011113448.1 RluA family pseudouridine synthase [Mycoplasma gallisepticum]2961.3e-101
uureWP_012560282.1 RluA family pseudouridine synthase [Ureaplasma urealyticum]2211.4e-72
phytWP_011160506.1 MULTISPECIES: RluA family pseudouridine synthase [Candidatus Phytoplasma asteris]1641.4e-50
bsubNP_389429.3 pseudouridylate synthase [Bacillus subtilis subsp. subtilis str. 168]1834.3e-57
caceWP_010965413.1 MULTISPECIES: RluA family pseudouridine synthase [Clostridium]1913.8e-60
ecoliNP_415604.1 23S rRNA pseudouridine(955/2504/2580) synthase [Escherichia coli str. K-12 substr. MG1655]1482.2e-43

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

PseudoU_synth_21RNA pseudouridylate synthase89-237108.73e-31

S41S4 domain11-5745.44.9e-12

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874649.1| RluA family pseudouridine synthase [Mycoplasma pneumoniae] 309/309 (100%)16490.0e+00
ref|WP_014325446.1| RluA family pseudouridine synthase [Mycoplasma pneumoniae]308/309 (99%)16440.0e+00
ref|WP_159203816.1| RluA family pseudouridine synthase [Mycoplasma pneumoniae]307/309 (99%)16400.0e+00
ref|WP_054175828.1| RluA family pseudouridine synthase [Mycoplasma pneumoniae]307/309 (99%)16390.0e+00
ref|WP_054175849.1| RluA family pseudouridine synthase [Mycoplasma pneumoniae]309/309 (100%)16370.0e+00
ref|WP_159226083.1| RluA family pseudouridine synthase [Mycoplasma pneumoniae]307/309 (99%)16370.0e+00
ref|WP_054175482.1| RluA family pseudouridine synthase [Mycoplasma pneumoniae]307/309 (99%)16320.0e+00
ref|WP_009885746.1| RluA family pseudouridine synthase [Mycoplasma genitalium]185/309 (59%)9067.0e-119
ref|WP_151029700.1| RluA family pseudouridine synthase [Mycoplasma gallisepticum]143/298 (47%)7591.4e-96
ref|WP_011113448.1| RluA family pseudouridine synthase [Mycoplasma gallisepticum]143/298 (47%)7572.9e-96


Maintained by Jun Ishikawa