General features

Gene IDMPN261
TypeCDS
From312256
To314391
Strand+
General nametopA
DefinitionDNA topoisomerase I
nt length2136
aa length711
m.w.81964.70
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE4140 topA DNA topoisomerase I 545803:5479266400.0e+00
mgenWP_009885678.1 type I DNA topoisomerase [Mycoplasma genitalium]10410.0e+00
mpulWP_041364416.1 type I DNA topoisomerase [Mycoplasma pulmonis]3271.4e-104
mmobWP_011264602.1 type I DNA topoisomerase [Mycoplasma mobile]3351.1e-107
mmycNP_975898.1 DNA topoisomerase I [Mycoplasma mycoides subsp. mycoides SC str. PG1]2659.4e-81
mgalWP_011113893.1 type I DNA topoisomerase [Mycoplasma gallisepticum]6470.0e+00
uureWP_012560269.1 type I DNA topoisomerase [Ureaplasma urealyticum]4959.4e-169
phytWP_011160653.1 type I DNA topoisomerase [Onion yellows phytoplasma]3654.6e-119
bsubNP_389494.1 DNA topoisomerase I [Bacillus subtilis subsp. subtilis str. 168]3985.1e-130
caceWP_010965091.1 MULTISPECIES: type I DNA topoisomerase [Clostridium]4187.8e-138
ecoliNP_415790.1 DNA topoisomerase 1 [Escherichia coli str. K-12 substr. MG1655]3345.7e-104

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Topoisom_bac1DNA topoisomerase148-592362.82.4e-108

zf-C4_Topoisom2Topoisomerase DNA binding C4 zinc finger621-660, 671-710100.43.3e-29

Toprim1Toprim domain5-13497.54.5e-28

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874618.1| type I DNA topoisomerase [Mycoplasma pneumoniae] 711/711 (100%)38140.0e+00
ref|WP_017532806.1| type I DNA topoisomerase [Mycoplasma pneumoniae]710/711 (99%)38130.0e+00
ref|WP_086131704.1| type I DNA topoisomerase [Mycoplasma pneumoniae]710/711 (99%)38100.0e+00
ref|WP_159201618.1| type I DNA topoisomerase [Mycoplasma pneumoniae]709/711 (99%)38090.0e+00
ref|WP_161609208.1| type I DNA topoisomerase [Mycoplasma pneumoniae]710/711 (99%)38080.0e+00
ref|WP_014325425.1| type I DNA topoisomerase [Mycoplasma pneumoniae]709/711 (99%)38080.0e+00
ref|WP_014574925.1| type I DNA topoisomerase [Mycoplasma pneumoniae]709/711 (99%)38080.0e+00
ref|WP_086118754.1| type I DNA topoisomerase [Mycoplasma pneumoniae]710/711 (99%)38070.0e+00
ref|WP_053344037.1| type I DNA topoisomerase [Mycoplasma pneumoniae]710/711 (99%)38060.0e+00
ref|WP_009885678.1| type I DNA topoisomerase [Mycoplasma genitalium]507/711 (71%)26920.0e+00


Maintained by Jun Ishikawa