General features

Gene IDMPN156
TypeCDS
From209560
To209910
Strand+
General namerbfA
Definitionribosome binding factor A
nt length351
aa length116
m.w.13389.40
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE1120 ribosome binding factor A 140574:140924694.3e-18
mgenWP_009885829.1 30S ribosome-binding factor RbfA [Mycoplasma genitalium]1675.1e-57
mpulWP_010925473.1 30S ribosome-binding factor RbfA [Mycoplasma pulmonis]501.0e-10
mmobWP_011264673.1 30S ribosome-binding factor RbfA [Mycoplasma mobile]348.6e-05
mmycNP_975895.1 hypothetical protein MSC_0927 [Mycoplasma mycoides subsp. mycoides SC str. PG1]221.6e+00
mgalWP_011113344.1 30S ribosome-binding factor RbfA [Mycoplasma gallisepticum]672.2e-17
uureWP_004025839.1 30S ribosome-binding factor RbfA [Ureaplasma urealyticum]561.9e-13
bsubNP_389547.1 pre-ribosomal (17S) RNA binding factor A [Bacillus subtilis subsp. subtilis str. 168]431.5e-07

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

RBFA1Ribosome-binding factor A6-10763.61.9e-17

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874513.1| 30S ribosome-binding factor RbfA [Mycoplasma pneumoniae] 116/116 (100%)6036.2e-79
ref|WP_009885829.1| 30S ribosome-binding factor RbfA [Mycoplasma genitalium]78/111 (70%)4231.7e-51
ref|WP_027119602.1| 30S ribosome-binding factor RbfA [Mycoplasma testudinis]56/112 (50%)2773.2e-29
ref|WP_033160062.1| 30S ribosome-binding factor RbfA [Mycoplasma alvi]49/111 (44%)2356.2e-23
ref|WP_027124120.1| 30S ribosome-binding factor RbfA [Mycoplasma pirum]47/111 (42%)2279.8e-22
ref|WP_004024728.1| 30S ribosome-binding factor RbfA [Mycoplasma iowae]39/110 (35%)1834.8e-15
ref|WP_027122205.1| 30S ribosome-binding factor RbfA [Mycoplasma imitans]38/116 (32%)1773.5e-14
ref|WP_011076940.1| 30S ribosome-binding factor RbfA [Mycoplasma penetrans]40/111 (36%)1696.1e-13
ref|WP_011883801.1| 30S ribosome-binding factor RbfA [Mycoplasma gallisepticum]39/114 (34%)1671.1e-12
ref|WP_011113344.1| 30S ribosome-binding factor RbfA [Mycoplasma gallisepticum]38/114 (33%)1634.7e-12


Maintained by Jun Ishikawa