General features

Gene IDMPN005
TypeCDS
From7312
To8574
Strand+
General nameserS
Definitionseryl-tRNA synthetase
nt length1263
aa length420
m.w.47923.92
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE4060 serS seryl-tRNA synthetase 531024:5323044084.5e-142
mgenWP_010869286.1 serine--tRNA ligase [Mycoplasma genitalium]6970.0e+00
mpulWP_010924838.1 serine--tRNA ligase [Mycoplasma pulmonis]2795.1e-92
mmobWP_011264612.1 serine--tRNA ligase [Mycoplasma mobile]3074.9e-103
mmycNP_975077.1 seryl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1]3056.5e-102
mgalWP_011113985.1 serine--tRNA ligase [Mycoplasma gallisepticum]4102.0e-143
uureWP_004026098.1 serine--tRNA ligase [Ureaplasma urealyticum]4081.6e-142
phytWP_011160458.1 MULTISPECIES: serine--tRNA ligase [Candidatus Phytoplasma asteris]3081.4e-103
bsubNP_387894.1 seryl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]3708.6e-127
caceWP_010963350.1 MULTISPECIES: serine--tRNA ligase [Clostridium]3223.8e-108
ecoliNP_415413.1 serine--tRNA ligase [Escherichia coli str. K-12 substr. MG1655]2951.9e-97

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

tRNA-synt_2b1tRNA synthetase class II core domain (G, H, P, S and T)216-394102.23e-29

Seryl_tRNA_N1Seryl-tRNA synthetase N-terminal domain1-10366.62e-18

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874362.1| serine--tRNA ligase [Mycoplasma pneumoniae] 420/420 (100%)22350.0e+00
ref|WP_014325280.1| serine--tRNA ligase [Mycoplasma pneumoniae]418/420 (99%)22220.0e+00
ref|WP_014574839.1| serine--tRNA ligase [Mycoplasma pneumoniae]417/420 (99%)22180.0e+00
ref|WP_014894093.1| serine--tRNA ligase [Mycoplasma genitalium]331/416 (79%)18120.0e+00
ref|WP_010869286.1| serine--tRNA ligase [Mycoplasma genitalium]330/416 (79%)17980.0e+00
ref|WP_027119759.1| serine--tRNA ligase [Mycoplasma testudinis]210/416 (50%)11153.8e-147
ref|WP_027123735.1| serine--tRNA ligase [Mycoplasma pirum]205/416 (49%)11084.0e-146
ref|WP_033160034.1| serine--tRNA ligase [Mycoplasma alvi]207/416 (49%)10902.3e-143
ref|WP_027122268.1| serine--tRNA ligase [Mycoplasma imitans]204/412 (49%)10754.6e-141
ref|WP_151059882.1| serine--tRNA ligase [Mycoplasma gallisepticum]203/411 (49%)10668.3e-140


Maintained by Jun Ishikawa