General features
| Gene ID | MYPE9200
|
| Type | CDS
|
| From | 1233129
|
| To | 1232950
|
| Strand | -
|
| General name | rpmF
|
| Definition | ribosomal protein L32
|
| nt length | 180
|
| aa length | 59
|
| m.w. | 6654.92
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN540 rpmF ribosomal protein L32 660680:660853 | 48 | 2.1e-11
|
| mgen | WP_009885820.1 50S ribosomal protein L32 [Mycoplasma genitalium] | 51 | 4.3e-13
|
| mpul | WP_010925128.1 50S ribosomal protein L32 [Mycoplasma pulmonis] | 55 | 2.5e-14
|
| mmob | WP_011264876.1 50S ribosomal protein L32 [Mycoplasma mobile] | 59 | 1.1e-15
|
| mmyc | NP_975574.1 50S ribosomal protein L32 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 70 | 6.4e-20
|
| mgal | WP_011113378.1 50S ribosomal protein L32 [Mycoplasma gallisepticum] | 43 | 1.5e-09
|
| uure | WP_004026178.1 50S ribosomal protein L32 [Ureaplasma urealyticum] | 59 | 8.4e-16
|
| phyt | WP_011160573.1 MULTISPECIES: 50S ribosomal protein L32 [Candidatus Phytoplasma asteris] | 45 | 1.7e-10
|
| bsub | NP_389391.1 ribosomal protein L32 [Bacillus subtilis subsp. subtilis str. 168] | 48 | 7.7e-11
|
| cace | WP_010965052.1 MULTISPECIES: 50S ribosomal protein L32 [Clostridium] | 49 | 4.6e-11
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L32p | 1 | Ribosomal L32p protein family | 2-54 | 73.4 | 1.3e-20
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077739.1| 50S ribosomal protein L32 [Mycoplasma penetrans] | 59/59 (100%) | 303 | 5.2e-35
|
| ref|WP_129374429.1| 50S ribosomal protein L32 [Mycoplasma penetrans] | 58/59 (98%) | 295 | 8.8e-34
|
| ref|WP_004025175.1| 50S ribosomal protein L32 [Mycoplasma iowae] | 39/59 (66%) | 199 | 4.0e-19
|
| ref|WP_013447700.1| MULTISPECIES: 50S ribosomal protein L32 [Mycoplasma] | 34/59 (57%) | 174 | 2.9e-15
|
| ref|WP_017697744.1| 50S ribosomal protein L32 [Mycoplasma mycoides] | 34/59 (57%) | 170 | 1.0e-14
|
| ref|WP_008362864.1| MULTISPECIES: 50S ribosomal protein L32 [Mycoplasma mycoides group] | 34/59 (57%) | 170 | 1.2e-14
|
| ref|WP_162649782.1| 50S ribosomal protein L32 [Spiroplasma sp. TIUS-1] | 32/59 (54%) | 169 | 1.8e-14
|
| ref|WP_026389548.1| 50S ribosomal protein L32 [Acholeplasma multilocale] | 31/59 (52%) | 166 | 5.0e-14
|
| ref|WP_113674763.1| 50S ribosomal protein L32 [Vallitalea guaymasensis] | 31/58 (53%) | 165 | 5.8e-14
|
| ref|WP_040093245.1| MULTISPECIES: 50S ribosomal protein L32 [Spiroplasma] | 32/58 (55%) | 165 | 6.0e-14
|
Maintained by Jun Ishikawa