General features

Gene IDMYPE9030
TypeCDS
From1212268
To1211705
Strand-
General name
DefinitionDUF402 domain-containing protein
nt length564
aa length187
m.w.22596.66
COG[J] Translation, ribosomal structure and biogenesis

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mmobWP_011265018.1 DUF402 domain-containing protein [Mycoplasma mobile]757.5e-19
uureWP_004025953.1 DUF402 domain-containing protein [Ureaplasma urealyticum]1372.3e-42
bsubNP_388748.3 putative RNA binding factor [Bacillus subtilis subsp. subtilis str. 168]902.9e-24
ecoliNP_416943.2 CPZ-55 prophage; uncharacterized protein YffQ [Escherichia coli str. K-12 substr. MG1655]302.1e-02

*mmob, Mycoplasma mobile; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

DUF4021Protein of unknown function (DUF402)65-13156.91.7e-15

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077723.1| DUF402 domain-containing protein [Mycoplasma penetrans]187/187 (100%)9561.6e-130
ref|WP_004024952.1| DUF402 domain-containing protein [Mycoplasma iowae]109/167 (65%)5691.4e-71
ref|WP_129692646.1| DUF402 domain-containing protein [Mycoplasma iowae]108/167 (64%)5621.5e-70
ref|WP_004025953.1| DUF402 domain-containing protein [Ureaplasma urealyticum]71/143 (49%)3455.5e-37
ref|WP_006688560.1| DUF402 domain-containing protein [Ureaplasma parvum]69/143 (48%)3456.2e-37
ref|WP_144446842.1| DUF402 domain-containing protein [Ureaplasma parvum]69/143 (48%)3446.8e-37
ref|WP_004027464.1| DUF402 domain-containing protein [Ureaplasma urealyticum]70/143 (48%)3394.0e-36
ref|WP_084277163.1| DUF402 domain-containing protein [Ureaplasma canigenitalium]76/173 (43%)3258.6e-34
ref|WP_081847820.1| DUF402 domain-containing protein [Ureaplasma diversum]61/137 (44%)2978.2e-30
ref|WP_069115900.1| DUF402 domain-containing protein [Spiroplasma helicoides]64/152 (42%)2701.8e-26

Maintained by Jun Ishikawa