General features

Gene IDMYPE8220
TypeCDS
From1103527
To1101659
Strand-
General namehsdR
Definitiontype I restriction-modification system R subunit
nt length1869
aa length622
m.w.72501.34
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN035 conserved hypothetical protein 41409:43409291.6e-01
mpulWP_010925478.1 type I restriction endonuclease subunit R [Mycoplasma pulmonis]621.5e-11
mgalWP_011113946.1 type I restriction endonuclease subunit R [Mycoplasma gallisepticum]581.5e-10
uureWP_012560350.1 type I restriction endonuclease subunit R [Ureaplasma urealyticum]482.4e-07
caceWP_010966109.1 MULTISPECIES: DEAD/DEAH box helicase family protein [Clostridium]831.7e-17
ecoliNP_418770.2 type I restriction enzyme EcoKI endonuclease component [Escherichia coli str. K-12 substr. MG1655]1446.0e-37

*mpne, Mycoplasma pneumoniae; mpul, Mycoplasma pulmonis; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

ResIII1Type III restriction enzyme, res subunit6-166139.88.3e-41

SWI2_SNF21SWI2/SNF2 ATPase10-20366.42.8e-18

EcoEI_R_C1EcoEI R protein C-terminal471-62162.26.5e-17

DEAD1DEAD/DEAH box helicase14-16730.82.2e-07

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_129374529.1| DEAD/DEAH box helicase family protein [Mycoplasma penetrans]617/618 (99%)32440.0e+00
ref|WP_060823244.1| DEAD/DEAH box helicase family protein [Mycoplasma arginini]369/616 (59%)19630.0e+00
ref|WP_129622082.1| MULTISPECIES: DEAD/DEAH box helicase family protein [Mycoplasma]369/617 (59%)18250.0e+00
ref|WP_084715753.1| DEAD/DEAH box helicase family protein [Virgibacillus sp. SK37]332/616 (53%)16600.0e+00
ref|WP_088225726.1| DEAD/DEAH box helicase family protein [Desulfosporosinus sp. FKB]334/615 (54%)16590.0e+00
ref|WP_157003720.1| DEAD/DEAH box helicase family protein [Eggerthella lenta]329/616 (53%)16520.0e+00
ref|WP_162526812.1| DEAD/DEAH box helicase family protein [Eggerthella lenta]329/616 (53%)16510.0e+00
ref|WP_157011219.1| DEAD/DEAH box helicase family protein [Eggerthella lenta]328/616 (53%)16470.0e+00
ref|WP_009304934.1| MULTISPECIES: DEAD/DEAH box helicase family protein [Eggerthella]328/616 (53%)16460.0e+00
ref|WP_114558124.1| MULTISPECIES: DEAD/DEAH box helicase family protein [Eggerthella]328/616 (53%)16460.0e+00


Maintained by Jun Ishikawa